Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.17■■□□□ 1.14
CDCP2Q5VXM1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDCP2Q5VXM1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDCP2Q5VXM1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDCP2Q5VXM1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDCP2Q5VXM1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDCP2Q5VXM1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDCP2Q5VXM1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
CDCP2Q5VXM1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDCP2Q5VXM1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDCP2Q5VXM1 AC097381.1-201ENST00000429019 1296 ntBASIC22.16■■□□□ 1.14
CDCP2Q5VXM1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.16■■□□□ 1.14
CDCP2Q5VXM1 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.16■■□□□ 1.14
CDCP2Q5VXM1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
CDCP2Q5VXM1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDCP2Q5VXM1 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.15■■□□□ 1.14
CDCP2Q5VXM1 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.15■■□□□ 1.14
CDCP2Q5VXM1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.15■■□□□ 1.14
CDCP2Q5VXM1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDCP2Q5VXM1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.15■■□□□ 1.14
CDCP2Q5VXM1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
CDCP2Q5VXM1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.15■■□□□ 1.14
CDCP2Q5VXM1 ANKRD20A6P-201ENST00000618763 204 ntBASIC22.15■■□□□ 1.14
CDCP2Q5VXM1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.15■■□□□ 1.14
CDCP2Q5VXM1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDCP2Q5VXM1 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.15■■□□□ 1.14
CDCP2Q5VXM1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CDCP2Q5VXM1 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CDCP2Q5VXM1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CDCP2Q5VXM1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.14■■□□□ 1.14
CDCP2Q5VXM1 RASA4CP-201ENST00000424092 1398 ntBASIC22.14■■□□□ 1.14
CDCP2Q5VXM1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
CDCP2Q5VXM1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CDCP2Q5VXM1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CDCP2Q5VXM1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDCP2Q5VXM1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDCP2Q5VXM1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDCP2Q5VXM1 SERBP1P1-201ENST00000396021 1160 ntBASIC22.14■■□□□ 1.13
CDCP2Q5VXM1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDCP2Q5VXM1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
CDCP2Q5VXM1 CA15P2-201ENST00000611168 834 ntBASIC22.14■■□□□ 1.13
CDCP2Q5VXM1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDCP2Q5VXM1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CDCP2Q5VXM1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDCP2Q5VXM1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDCP2Q5VXM1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
CDCP2Q5VXM1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.13■■□□□ 1.13
CDCP2Q5VXM1 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.13■■□□□ 1.13
CDCP2Q5VXM1 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDCP2Q5VXM1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.13■■□□□ 1.13
CDCP2Q5VXM1 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CDCP2Q5VXM1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDCP2Q5VXM1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.12■■□□□ 1.13
CDCP2Q5VXM1 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.11■■□□□ 1.13
CDCP2Q5VXM1 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDCP2Q5VXM1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDCP2Q5VXM1 AC010501.1-201ENST00000606270 1962 ntBASIC22.11■■□□□ 1.13
CDCP2Q5VXM1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDCP2Q5VXM1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDCP2Q5VXM1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
CDCP2Q5VXM1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.11■■□□□ 1.13
CDCP2Q5VXM1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.11■■□□□ 1.13
CDCP2Q5VXM1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDCP2Q5VXM1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.11■■□□□ 1.13
CDCP2Q5VXM1 AL138724.1-201ENST00000606771 1088 ntBASIC22.11■■□□□ 1.13
CDCP2Q5VXM1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDCP2Q5VXM1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDCP2Q5VXM1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.11■■□□□ 1.13
CDCP2Q5VXM1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
CDCP2Q5VXM1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDCP2Q5VXM1 AC011298.3-201ENST00000615796 283 ntBASIC22.1■■□□□ 1.13
CDCP2Q5VXM1 AC131274.2-201ENST00000580697 1507 ntBASIC22.1■■□□□ 1.13
CDCP2Q5VXM1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CDCP2Q5VXM1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDCP2Q5VXM1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CDCP2Q5VXM1 AC027682.1-201ENST00000562846 899 ntBASIC22.09■■□□□ 1.13
CDCP2Q5VXM1 AC099791.2-201ENST00000605725 427 ntBASIC22.09■■□□□ 1.13
CDCP2Q5VXM1 AC087623.3-201ENST00000607047 1098 ntBASIC22.09■■□□□ 1.13
CDCP2Q5VXM1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CDCP2Q5VXM1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDCP2Q5VXM1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.08■■□□□ 1.13
CDCP2Q5VXM1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
CDCP2Q5VXM1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDCP2Q5VXM1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CDCP2Q5VXM1 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.08■■□□□ 1.13
CDCP2Q5VXM1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.08■■□□□ 1.13
CDCP2Q5VXM1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.08■■□□□ 1.13
CDCP2Q5VXM1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CDCP2Q5VXM1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDCP2Q5VXM1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
CDCP2Q5VXM1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CDCP2Q5VXM1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
CDCP2Q5VXM1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
CDCP2Q5VXM1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.07■■□□□ 1.12
CDCP2Q5VXM1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDCP2Q5VXM1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
CDCP2Q5VXM1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.06■■□□□ 1.12
CDCP2Q5VXM1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDCP2Q5VXM1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CDCP2Q5VXM1 AL162430.1-201ENST00000480705 870 ntBASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms