Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LCN1P1Q5VSP4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LCN1P1Q5VSP4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
LCN1P1Q5VSP4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.77■□□□□ 0.92
LCN1P1Q5VSP4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
LCN1P1Q5VSP4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
LCN1P1Q5VSP4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
LCN1P1Q5VSP4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.77■□□□□ 0.91
LCN1P1Q5VSP4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
LCN1P1Q5VSP4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LCN1P1Q5VSP4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
LCN1P1Q5VSP4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LCN1P1Q5VSP4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LCN1P1Q5VSP4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LCN1P1Q5VSP4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.76■□□□□ 0.91
LCN1P1Q5VSP4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
LCN1P1Q5VSP4 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LCN1P1Q5VSP4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LCN1P1Q5VSP4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LCN1P1Q5VSP4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LCN1P1Q5VSP4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LCN1P1Q5VSP4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.75■□□□□ 0.91
LCN1P1Q5VSP4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LCN1P1Q5VSP4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.75■□□□□ 0.91
LCN1P1Q5VSP4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LCN1P1Q5VSP4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.75■□□□□ 0.91
LCN1P1Q5VSP4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LCN1P1Q5VSP4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
LCN1P1Q5VSP4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
LCN1P1Q5VSP4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LCN1P1Q5VSP4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
LCN1P1Q5VSP4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.74■□□□□ 0.91
LCN1P1Q5VSP4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LCN1P1Q5VSP4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LCN1P1Q5VSP4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LCN1P1Q5VSP4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
LCN1P1Q5VSP4 RAP2CP1-202ENST00000605179 643 ntBASIC20.74■□□□□ 0.91
LCN1P1Q5VSP4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LCN1P1Q5VSP4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LCN1P1Q5VSP4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
LCN1P1Q5VSP4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LCN1P1Q5VSP4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.73■□□□□ 0.91
LCN1P1Q5VSP4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
LCN1P1Q5VSP4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LCN1P1Q5VSP4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.73■□□□□ 0.91
LCN1P1Q5VSP4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
LCN1P1Q5VSP4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
LCN1P1Q5VSP4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.72■□□□□ 0.91
LCN1P1Q5VSP4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LCN1P1Q5VSP4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LCN1P1Q5VSP4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LCN1P1Q5VSP4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LCN1P1Q5VSP4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LCN1P1Q5VSP4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LCN1P1Q5VSP4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.71■□□□□ 0.91
LCN1P1Q5VSP4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.71■□□□□ 0.91
LCN1P1Q5VSP4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
LCN1P1Q5VSP4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LCN1P1Q5VSP4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LCN1P1Q5VSP4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.71■□□□□ 0.91
LCN1P1Q5VSP4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
LCN1P1Q5VSP4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LCN1P1Q5VSP4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LCN1P1Q5VSP4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.7■□□□□ 0.9
LCN1P1Q5VSP4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LCN1P1Q5VSP4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LCN1P1Q5VSP4 AC026202.3-201ENST00000600805 1127 ntBASIC20.7■□□□□ 0.9
LCN1P1Q5VSP4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
LCN1P1Q5VSP4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
LCN1P1Q5VSP4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.7■□□□□ 0.9
LCN1P1Q5VSP4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
LCN1P1Q5VSP4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LCN1P1Q5VSP4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.69■□□□□ 0.9
LCN1P1Q5VSP4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LCN1P1Q5VSP4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LCN1P1Q5VSP4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
LCN1P1Q5VSP4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.69■□□□□ 0.9
LCN1P1Q5VSP4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
LCN1P1Q5VSP4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
LCN1P1Q5VSP4 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LCN1P1Q5VSP4 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.69■□□□□ 0.9
LCN1P1Q5VSP4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.69■□□□□ 0.9
LCN1P1Q5VSP4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.69■□□□□ 0.9
LCN1P1Q5VSP4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.69■□□□□ 0.9
LCN1P1Q5VSP4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LCN1P1Q5VSP4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LCN1P1Q5VSP4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LCN1P1Q5VSP4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LCN1P1Q5VSP4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LCN1P1Q5VSP4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LCN1P1Q5VSP4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LCN1P1Q5VSP4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LCN1P1Q5VSP4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LCN1P1Q5VSP4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.68■□□□□ 0.9
LCN1P1Q5VSP4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.68■□□□□ 0.9
LCN1P1Q5VSP4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LCN1P1Q5VSP4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LCN1P1Q5VSP4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LCN1P1Q5VSP4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LCN1P1Q5VSP4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms