Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS13DQ5THJ4 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS13DQ5THJ4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VPS13DQ5THJ4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VPS13DQ5THJ4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC15.81■□□□□ 0.12
VPS13DQ5THJ4 AC005703.6-201ENST00000623265 1329 ntBASIC15.81■□□□□ 0.12
VPS13DQ5THJ4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC15.8■□□□□ 0.12
VPS13DQ5THJ4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS13DQ5THJ4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
VPS13DQ5THJ4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC15.8■□□□□ 0.12
VPS13DQ5THJ4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
VPS13DQ5THJ4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC15.8■□□□□ 0.12
VPS13DQ5THJ4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS13DQ5THJ4 IRS3P-201ENST00000223076 1006 ntBASIC15.8■□□□□ 0.12
VPS13DQ5THJ4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VPS13DQ5THJ4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VPS13DQ5THJ4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VPS13DQ5THJ4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC15.79■□□□□ 0.12
VPS13DQ5THJ4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS13DQ5THJ4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VPS13DQ5THJ4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC15.79■□□□□ 0.12
VPS13DQ5THJ4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC15.79■□□□□ 0.12
VPS13DQ5THJ4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC15.79■□□□□ 0.12
VPS13DQ5THJ4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
VPS13DQ5THJ4 REST-206ENST00000612429 1376 ntTSL 5 BASIC15.79■□□□□ 0.12
VPS13DQ5THJ4 REST-207ENST00000616975 1370 ntTSL 5 BASIC15.79■□□□□ 0.12
VPS13DQ5THJ4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
VPS13DQ5THJ4 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS13DQ5THJ4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC15.78■□□□□ 0.12
VPS13DQ5THJ4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS13DQ5THJ4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC15.78■□□□□ 0.12
VPS13DQ5THJ4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC15.78■□□□□ 0.12
VPS13DQ5THJ4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
VPS13DQ5THJ4 MIR4767-201ENST00000582827 78 ntBASIC15.78■□□□□ 0.12
VPS13DQ5THJ4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC15.78■□□□□ 0.12
VPS13DQ5THJ4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC15.78■□□□□ 0.12
VPS13DQ5THJ4 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC15.78■□□□□ 0.12
VPS13DQ5THJ4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS13DQ5THJ4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC15.78■□□□□ 0.12
VPS13DQ5THJ4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS13DQ5THJ4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VPS13DQ5THJ4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
VPS13DQ5THJ4 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
VPS13DQ5THJ4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VPS13DQ5THJ4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VPS13DQ5THJ4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC15.77■□□□□ 0.11
VPS13DQ5THJ4 PTCHD3P2-201ENST00000424937 1205 ntBASIC15.77■□□□□ 0.11
VPS13DQ5THJ4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
VPS13DQ5THJ4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
VPS13DQ5THJ4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
VPS13DQ5THJ4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
VPS13DQ5THJ4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
VPS13DQ5THJ4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC15.77■□□□□ 0.11
VPS13DQ5THJ4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC15.76■□□□□ 0.11
VPS13DQ5THJ4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
VPS13DQ5THJ4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS13DQ5THJ4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC15.76■□□□□ 0.11
VPS13DQ5THJ4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC15.76■□□□□ 0.11
VPS13DQ5THJ4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC15.76■□□□□ 0.11
VPS13DQ5THJ4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC15.76■□□□□ 0.11
VPS13DQ5THJ4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
VPS13DQ5THJ4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC15.76■□□□□ 0.11
VPS13DQ5THJ4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VPS13DQ5THJ4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VPS13DQ5THJ4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC15.76■□□□□ 0.11
VPS13DQ5THJ4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
VPS13DQ5THJ4 AL031602.1-201ENST00000633169 911 ntBASIC15.76■□□□□ 0.11
VPS13DQ5THJ4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS13DQ5THJ4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS13DQ5THJ4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
VPS13DQ5THJ4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC15.75■□□□□ 0.11
VPS13DQ5THJ4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC15.75■□□□□ 0.11
VPS13DQ5THJ4 AL138724.1-201ENST00000606771 1088 ntBASIC15.75■□□□□ 0.11
VPS13DQ5THJ4 AC009102.2-201ENST00000606772 1639 ntBASIC15.75■□□□□ 0.11
VPS13DQ5THJ4 AC010501.1-201ENST00000606270 1962 ntBASIC15.75■□□□□ 0.11
VPS13DQ5THJ4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS13DQ5THJ4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS13DQ5THJ4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS13DQ5THJ4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
VPS13DQ5THJ4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC15.75■□□□□ 0.11
VPS13DQ5THJ4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS13DQ5THJ4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS13DQ5THJ4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS13DQ5THJ4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS13DQ5THJ4 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS13DQ5THJ4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VPS13DQ5THJ4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VPS13DQ5THJ4 AC034268.1-201ENST00000441047 882 ntBASIC15.74■□□□□ 0.11
VPS13DQ5THJ4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC15.74■□□□□ 0.11
VPS13DQ5THJ4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC15.74■□□□□ 0.11
VPS13DQ5THJ4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
VPS13DQ5THJ4 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VPS13DQ5THJ4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VPS13DQ5THJ4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
VPS13DQ5THJ4 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VPS13DQ5THJ4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
VPS13DQ5THJ4 AC027682.1-201ENST00000562846 899 ntBASIC15.73■□□□□ 0.11
VPS13DQ5THJ4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
VPS13DQ5THJ4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
VPS13DQ5THJ4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms