Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.81■■□□□ 1.08
LRIF1Q5T3J3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
LRIF1Q5T3J3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LRIF1Q5T3J3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRIF1Q5T3J3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRIF1Q5T3J3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.8■■□□□ 1.08
LRIF1Q5T3J3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRIF1Q5T3J3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.8■■□□□ 1.08
LRIF1Q5T3J3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRIF1Q5T3J3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.8■■□□□ 1.08
LRIF1Q5T3J3 AC090877.2-201ENST00000558441 1738 ntBASIC21.8■■□□□ 1.08
LRIF1Q5T3J3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRIF1Q5T3J3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRIF1Q5T3J3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRIF1Q5T3J3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRIF1Q5T3J3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.79■■□□□ 1.08
LRIF1Q5T3J3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRIF1Q5T3J3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LRIF1Q5T3J3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRIF1Q5T3J3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRIF1Q5T3J3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRIF1Q5T3J3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.79■■□□□ 1.08
LRIF1Q5T3J3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LRIF1Q5T3J3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRIF1Q5T3J3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.79■■□□□ 1.08
LRIF1Q5T3J3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
LRIF1Q5T3J3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRIF1Q5T3J3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRIF1Q5T3J3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.78■■□□□ 1.08
LRIF1Q5T3J3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LRIF1Q5T3J3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRIF1Q5T3J3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRIF1Q5T3J3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRIF1Q5T3J3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
LRIF1Q5T3J3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LRIF1Q5T3J3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRIF1Q5T3J3 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRIF1Q5T3J3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
LRIF1Q5T3J3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LRIF1Q5T3J3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
LRIF1Q5T3J3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
LRIF1Q5T3J3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
LRIF1Q5T3J3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LRIF1Q5T3J3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LRIF1Q5T3J3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.77■■□□□ 1.07
LRIF1Q5T3J3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
LRIF1Q5T3J3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.77■■□□□ 1.07
LRIF1Q5T3J3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LRIF1Q5T3J3 C9orf163-202ENST00000624034 2573 ntBASIC21.76■■□□□ 1.07
LRIF1Q5T3J3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LRIF1Q5T3J3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRIF1Q5T3J3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LRIF1Q5T3J3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
LRIF1Q5T3J3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
LRIF1Q5T3J3 AL161729.1-201ENST00000604104 1402 ntBASIC21.76■■□□□ 1.07
LRIF1Q5T3J3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
LRIF1Q5T3J3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LRIF1Q5T3J3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRIF1Q5T3J3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
LRIF1Q5T3J3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRIF1Q5T3J3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRIF1Q5T3J3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRIF1Q5T3J3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
LRIF1Q5T3J3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.75■■□□□ 1.07
LRIF1Q5T3J3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRIF1Q5T3J3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.75■■□□□ 1.07
LRIF1Q5T3J3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
LRIF1Q5T3J3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.75■■□□□ 1.07
LRIF1Q5T3J3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRIF1Q5T3J3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRIF1Q5T3J3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRIF1Q5T3J3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
LRIF1Q5T3J3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRIF1Q5T3J3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.74■■□□□ 1.07
LRIF1Q5T3J3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.74■■□□□ 1.07
LRIF1Q5T3J3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
LRIF1Q5T3J3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRIF1Q5T3J3 AC079834.2-201ENST00000609776 1949 ntBASIC21.73■■□□□ 1.07
LRIF1Q5T3J3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRIF1Q5T3J3 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRIF1Q5T3J3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
LRIF1Q5T3J3 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LRIF1Q5T3J3 SPCS2P3-201ENST00000500401 656 ntBASIC21.73■■□□□ 1.07
LRIF1Q5T3J3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRIF1Q5T3J3 AC087393.1-201ENST00000582896 145 ntBASIC21.73■■□□□ 1.07
LRIF1Q5T3J3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LRIF1Q5T3J3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LRIF1Q5T3J3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LRIF1Q5T3J3 RNF126P1-201ENST00000567452 1320 ntBASIC21.73■■□□□ 1.07
LRIF1Q5T3J3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
LRIF1Q5T3J3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRIF1Q5T3J3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.73■■□□□ 1.07
LRIF1Q5T3J3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
LRIF1Q5T3J3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRIF1Q5T3J3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRIF1Q5T3J3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRIF1Q5T3J3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRIF1Q5T3J3 AL592295.1-201ENST00000400984 884 ntBASIC21.72■■□□□ 1.07
LRIF1Q5T3J3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LRIF1Q5T3J3 AC018755.3-202ENST00000596210 929 ntBASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms