Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC30.32■■■□□ 2.44
NUP188Q5SRE5 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC30.32■■■□□ 2.44
NUP188Q5SRE5 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC30.32■■■□□ 2.44
NUP188Q5SRE5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC30.32■■■□□ 2.44
NUP188Q5SRE5 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC30.32■■■□□ 2.44
NUP188Q5SRE5 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC30.32■■■□□ 2.44
NUP188Q5SRE5 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
NUP188Q5SRE5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC30.31■■■□□ 2.44
NUP188Q5SRE5 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC30.31■■■□□ 2.44
NUP188Q5SRE5 SERBP1P1-201ENST00000396021 1160 ntBASIC30.31■■■□□ 2.44
NUP188Q5SRE5 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
NUP188Q5SRE5 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
NUP188Q5SRE5 SSSCA1-AS1-201ENST00000567594 614 ntBASIC30.31■■■□□ 2.44
NUP188Q5SRE5 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
NUP188Q5SRE5 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
NUP188Q5SRE5 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
NUP188Q5SRE5 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC30.31■■■□□ 2.44
NUP188Q5SRE5 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC30.3■■■□□ 2.44
NUP188Q5SRE5 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
NUP188Q5SRE5 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
NUP188Q5SRE5 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC30.3■■■□□ 2.44
NUP188Q5SRE5 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC30.29■■■□□ 2.44
NUP188Q5SRE5 DUX4L2-201ENST00000561772 1275 ntBASIC30.29■■■□□ 2.44
NUP188Q5SRE5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC30.29■■■□□ 2.44
NUP188Q5SRE5 DUX4L6-201ENST00000626483 1275 ntBASIC30.29■■■□□ 2.44
NUP188Q5SRE5 DUX4L1-201ENST00000627662 1275 ntBASIC30.29■■■□□ 2.44
NUP188Q5SRE5 DUX4L8-201ENST00000629013 1275 ntBASIC30.29■■■□□ 2.44
NUP188Q5SRE5 DUX4L3-201ENST00000630187 1275 ntBASIC30.29■■■□□ 2.44
NUP188Q5SRE5 DUX4L7-201ENST00000630678 1275 ntBASIC30.29■■■□□ 2.44
NUP188Q5SRE5 DUX4L5-201ENST00000630834 1275 ntBASIC30.29■■■□□ 2.44
NUP188Q5SRE5 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC30.29■■■□□ 2.44
NUP188Q5SRE5 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC30.29■■■□□ 2.44
NUP188Q5SRE5 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC30.29■■■□□ 2.44
NUP188Q5SRE5 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC30.28■■■□□ 2.44
NUP188Q5SRE5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
NUP188Q5SRE5 DLX3-202ENST00000512495 834 ntTSL 2 BASIC30.28■■■□□ 2.44
NUP188Q5SRE5 AC011298.3-201ENST00000615796 283 ntBASIC30.28■■■□□ 2.44
NUP188Q5SRE5 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
NUP188Q5SRE5 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC30.28■■■□□ 2.44
NUP188Q5SRE5 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
NUP188Q5SRE5 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC30.28■■■□□ 2.44
NUP188Q5SRE5 SYT6-210ENST00000641643 1587 ntBASIC30.28■■■□□ 2.44
NUP188Q5SRE5 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
NUP188Q5SRE5 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC30.27■■■□□ 2.44
NUP188Q5SRE5 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
NUP188Q5SRE5 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC30.27■■■□□ 2.44
NUP188Q5SRE5 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
NUP188Q5SRE5 AC004911.1-201ENST00000416316 871 ntBASIC30.27■■■□□ 2.44
NUP188Q5SRE5 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC30.27■■■□□ 2.44
NUP188Q5SRE5 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC30.27■■■□□ 2.44
NUP188Q5SRE5 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
NUP188Q5SRE5 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC30.26■■■□□ 2.44
NUP188Q5SRE5 ESRRAP2-201ENST00000418437 1549 ntBASIC30.26■■■□□ 2.43
NUP188Q5SRE5 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC30.26■■■□□ 2.43
NUP188Q5SRE5 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC30.26■■■□□ 2.43
NUP188Q5SRE5 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
NUP188Q5SRE5 AC008764.7-201ENST00000593779 1081 ntBASIC30.26■■■□□ 2.43
NUP188Q5SRE5 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
NUP188Q5SRE5 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC30.25■■■□□ 2.43
NUP188Q5SRE5 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC30.25■■■□□ 2.43
NUP188Q5SRE5 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
NUP188Q5SRE5 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
NUP188Q5SRE5 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC30.25■■■□□ 2.43
NUP188Q5SRE5 PKM-203ENST00000389093 2279 ntTSL 5 BASIC30.24■■■□□ 2.43
NUP188Q5SRE5 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC30.24■■■□□ 2.43
NUP188Q5SRE5 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC30.24■■■□□ 2.43
NUP188Q5SRE5 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
NUP188Q5SRE5 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
NUP188Q5SRE5 SNAI3-AS1-204ENST00000567997 2048 ntBASIC30.24■■■□□ 2.43
NUP188Q5SRE5 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
NUP188Q5SRE5 AK1-201ENST00000223836 736 ntTSL 3 BASIC30.23■■■□□ 2.43
NUP188Q5SRE5 HLA-L-209ENST00000420110 1011 ntBASIC30.23■■■□□ 2.43
NUP188Q5SRE5 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC30.23■■■□□ 2.43
NUP188Q5SRE5 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
NUP188Q5SRE5 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC30.22■■■□□ 2.43
NUP188Q5SRE5 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC30.22■■■□□ 2.43
NUP188Q5SRE5 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
NUP188Q5SRE5 AC096887.2-201ENST00000623443 1957 ntBASIC30.22■■■□□ 2.43
NUP188Q5SRE5 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
NUP188Q5SRE5 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC30.22■■■□□ 2.43
NUP188Q5SRE5 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
NUP188Q5SRE5 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
NUP188Q5SRE5 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC30.22■■■□□ 2.43
NUP188Q5SRE5 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC30.22■■■□□ 2.43
NUP188Q5SRE5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC30.22■■■□□ 2.43
NUP188Q5SRE5 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
NUP188Q5SRE5 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC30.21■■■□□ 2.43
NUP188Q5SRE5 VPS53-216ENST00000574029 585 ntTSL 4 BASIC30.21■■■□□ 2.43
NUP188Q5SRE5 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC30.2■■■□□ 2.43
NUP188Q5SRE5 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.42
NUP188Q5SRE5 ABHD17AP1-201ENST00000358206 933 ntBASIC30.19■■■□□ 2.42
NUP188Q5SRE5 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
NUP188Q5SRE5 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
NUP188Q5SRE5 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
NUP188Q5SRE5 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
NUP188Q5SRE5 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC30.19■■■□□ 2.42
NUP188Q5SRE5 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC30.19■■■□□ 2.42
NUP188Q5SRE5 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
NUP188Q5SRE5 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
NUP188Q5SRE5 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms