Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PTPN20Q4JDL3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PTPN20Q4JDL3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PTPN20Q4JDL3 AL031848.2-201ENST00000607670 837 ntBASIC24.4■■□□□ 1.5
PTPN20Q4JDL3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
PTPN20Q4JDL3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
PTPN20Q4JDL3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PTPN20Q4JDL3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
PTPN20Q4JDL3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
PTPN20Q4JDL3 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.39■■□□□ 1.49
PTPN20Q4JDL3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.39■■□□□ 1.49
PTPN20Q4JDL3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PTPN20Q4JDL3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
PTPN20Q4JDL3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PTPN20Q4JDL3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.38■■□□□ 1.49
PTPN20Q4JDL3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC24.38■■□□□ 1.49
PTPN20Q4JDL3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PTPN20Q4JDL3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
PTPN20Q4JDL3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC24.37■■□□□ 1.49
PTPN20Q4JDL3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
PTPN20Q4JDL3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
PTPN20Q4JDL3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC24.37■■□□□ 1.49
PTPN20Q4JDL3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
PTPN20Q4JDL3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.36■■□□□ 1.49
PTPN20Q4JDL3 AC131274.2-201ENST00000580697 1507 ntBASIC24.36■■□□□ 1.49
PTPN20Q4JDL3 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
PTPN20Q4JDL3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PTPN20Q4JDL3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PTPN20Q4JDL3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PTPN20Q4JDL3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.36■■□□□ 1.49
PTPN20Q4JDL3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PTPN20Q4JDL3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.35■■□□□ 1.49
PTPN20Q4JDL3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PTPN20Q4JDL3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.35■■□□□ 1.49
PTPN20Q4JDL3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.35■■□□□ 1.49
PTPN20Q4JDL3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PTPN20Q4JDL3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PTPN20Q4JDL3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PTPN20Q4JDL3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PTPN20Q4JDL3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.34■■□□□ 1.49
PTPN20Q4JDL3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.34■■□□□ 1.49
PTPN20Q4JDL3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.34■■□□□ 1.49
PTPN20Q4JDL3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PTPN20Q4JDL3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.34■■□□□ 1.49
PTPN20Q4JDL3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PTPN20Q4JDL3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.34■■□□□ 1.49
PTPN20Q4JDL3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC24.34■■□□□ 1.49
PTPN20Q4JDL3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
PTPN20Q4JDL3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PTPN20Q4JDL3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PTPN20Q4JDL3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
PTPN20Q4JDL3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.33■■□□□ 1.49
PTPN20Q4JDL3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
PTPN20Q4JDL3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PTPN20Q4JDL3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
PTPN20Q4JDL3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PTPN20Q4JDL3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
PTPN20Q4JDL3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PTPN20Q4JDL3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24.32■■□□□ 1.48
PTPN20Q4JDL3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
PTPN20Q4JDL3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
PTPN20Q4JDL3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
PTPN20Q4JDL3 ABCB10P4-201ENST00000566803 2184 ntBASIC24.32■■□□□ 1.48
PTPN20Q4JDL3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PTPN20Q4JDL3 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.32■■□□□ 1.48
PTPN20Q4JDL3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PTPN20Q4JDL3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC24.32■■□□□ 1.48
PTPN20Q4JDL3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.32■■□□□ 1.48
PTPN20Q4JDL3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
PTPN20Q4JDL3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PTPN20Q4JDL3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PTPN20Q4JDL3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PTPN20Q4JDL3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PTPN20Q4JDL3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
PTPN20Q4JDL3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.31■■□□□ 1.48
PTPN20Q4JDL3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
PTPN20Q4JDL3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
PTPN20Q4JDL3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PTPN20Q4JDL3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PTPN20Q4JDL3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PTPN20Q4JDL3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
PTPN20Q4JDL3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.3■■□□□ 1.48
PTPN20Q4JDL3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC24.3■■□□□ 1.48
PTPN20Q4JDL3 AL022069.1-201ENST00000568025 1636 ntBASIC24.29■■□□□ 1.48
PTPN20Q4JDL3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PTPN20Q4JDL3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.29■■□□□ 1.48
PTPN20Q4JDL3 AC137630.3-201ENST00000607245 391 ntBASIC24.29■■□□□ 1.48
PTPN20Q4JDL3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PTPN20Q4JDL3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
PTPN20Q4JDL3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
PTPN20Q4JDL3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PTPN20Q4JDL3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
PTPN20Q4JDL3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PTPN20Q4JDL3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC24.28■■□□□ 1.48
PTPN20Q4JDL3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC24.27■■□□□ 1.48
PTPN20Q4JDL3 AL161729.1-201ENST00000604104 1402 ntBASIC24.27■■□□□ 1.48
PTPN20Q4JDL3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PTPN20Q4JDL3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PTPN20Q4JDL3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PTPN20Q4JDL3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 178.4 ms