Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC25.65■■□□□ 1.7
TRIM60Q495X7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TRIM60Q495X7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC25.65■■□□□ 1.7
TRIM60Q495X7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC25.65■■□□□ 1.7
TRIM60Q495X7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
TRIM60Q495X7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TRIM60Q495X7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TRIM60Q495X7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.64■■□□□ 1.7
TRIM60Q495X7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC25.64■■□□□ 1.7
TRIM60Q495X7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC25.64■■□□□ 1.7
TRIM60Q495X7 IKBKGP1-201ENST00000612193 1073 ntBASIC25.64■■□□□ 1.7
TRIM60Q495X7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TRIM60Q495X7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
TRIM60Q495X7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
TRIM60Q495X7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
TRIM60Q495X7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
TRIM60Q495X7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
TRIM60Q495X7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
TRIM60Q495X7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC25.63■■□□□ 1.69
TRIM60Q495X7 SP2-202ENST00000613139 908 ntTSL 5 BASIC25.63■■□□□ 1.69
TRIM60Q495X7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC25.63■■□□□ 1.69
TRIM60Q495X7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TRIM60Q495X7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
TRIM60Q495X7 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.63■■□□□ 1.69
TRIM60Q495X7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TRIM60Q495X7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
TRIM60Q495X7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.62■■□□□ 1.69
TRIM60Q495X7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
TRIM60Q495X7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.62■■□□□ 1.69
TRIM60Q495X7 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.62■■□□□ 1.69
TRIM60Q495X7 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.62■■□□□ 1.69
TRIM60Q495X7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC25.62■■□□□ 1.69
TRIM60Q495X7 AL138724.1-201ENST00000606771 1088 ntBASIC25.62■■□□□ 1.69
TRIM60Q495X7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
TRIM60Q495X7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.62■■□□□ 1.69
TRIM60Q495X7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
TRIM60Q495X7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.61■■□□□ 1.69
TRIM60Q495X7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
TRIM60Q495X7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
TRIM60Q495X7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
TRIM60Q495X7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TRIM60Q495X7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
TRIM60Q495X7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.61■■□□□ 1.69
TRIM60Q495X7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TRIM60Q495X7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TRIM60Q495X7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
TRIM60Q495X7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
TRIM60Q495X7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
TRIM60Q495X7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TRIM60Q495X7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
TRIM60Q495X7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC25.59■■□□□ 1.69
TRIM60Q495X7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.59■■□□□ 1.69
TRIM60Q495X7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
TRIM60Q495X7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC25.59■■□□□ 1.69
TRIM60Q495X7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
TRIM60Q495X7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
TRIM60Q495X7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.58■■□□□ 1.69
TRIM60Q495X7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TRIM60Q495X7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
TRIM60Q495X7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
TRIM60Q495X7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC25.58■■□□□ 1.69
TRIM60Q495X7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC25.58■■□□□ 1.69
TRIM60Q495X7 AC022517.1-201ENST00000592429 346 ntBASIC25.58■■□□□ 1.69
TRIM60Q495X7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
TRIM60Q495X7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
TRIM60Q495X7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
TRIM60Q495X7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
TRIM60Q495X7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC25.57■■□□□ 1.68
TRIM60Q495X7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.57■■□□□ 1.68
TRIM60Q495X7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TRIM60Q495X7 AC097639.1-201ENST00000565519 1891 ntBASIC25.57■■□□□ 1.68
TRIM60Q495X7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.56■■□□□ 1.68
TRIM60Q495X7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.56■■□□□ 1.68
TRIM60Q495X7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TRIM60Q495X7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
TRIM60Q495X7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TRIM60Q495X7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TRIM60Q495X7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
TRIM60Q495X7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC25.56■■□□□ 1.68
TRIM60Q495X7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TRIM60Q495X7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TRIM60Q495X7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
TRIM60Q495X7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
TRIM60Q495X7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TRIM60Q495X7 AC034268.1-201ENST00000441047 882 ntBASIC25.55■■□□□ 1.68
TRIM60Q495X7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC25.55■■□□□ 1.68
TRIM60Q495X7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TRIM60Q495X7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC25.55■■□□□ 1.68
TRIM60Q495X7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.55■■□□□ 1.68
TRIM60Q495X7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TRIM60Q495X7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.54■■□□□ 1.68
TRIM60Q495X7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC25.54■■□□□ 1.68
TRIM60Q495X7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC25.54■■□□□ 1.68
TRIM60Q495X7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC25.54■■□□□ 1.68
TRIM60Q495X7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC25.54■■□□□ 1.68
TRIM60Q495X7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC25.54■■□□□ 1.68
TRIM60Q495X7 AC136469.2-201ENST00000623944 1028 ntBASIC25.54■■□□□ 1.68
TRIM60Q495X7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
TRIM60Q495X7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.53■■□□□ 1.68
TRIM60Q495X7 AC096887.2-201ENST00000623443 1957 ntBASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms