Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TBC1D28Q2M2D7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.06■□□□□ 0.8
TBC1D28Q2M2D7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.06■□□□□ 0.8
TBC1D28Q2M2D7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TBC1D28Q2M2D7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TBC1D28Q2M2D7 AL139125.2-201ENST00000623134 1869 ntBASIC20.05■□□□□ 0.8
TBC1D28Q2M2D7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TBC1D28Q2M2D7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TBC1D28Q2M2D7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.05■□□□□ 0.8
TBC1D28Q2M2D7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TBC1D28Q2M2D7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TBC1D28Q2M2D7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TBC1D28Q2M2D7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.05■□□□□ 0.8
TBC1D28Q2M2D7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.05■□□□□ 0.8
TBC1D28Q2M2D7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.05■□□□□ 0.8
TBC1D28Q2M2D7 AL035685.1-201ENST00000636663 812 ntBASIC20.05■□□□□ 0.8
TBC1D28Q2M2D7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TBC1D28Q2M2D7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.05■□□□□ 0.8
TBC1D28Q2M2D7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TBC1D28Q2M2D7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TBC1D28Q2M2D7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TBC1D28Q2M2D7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TBC1D28Q2M2D7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TBC1D28Q2M2D7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TBC1D28Q2M2D7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TBC1D28Q2M2D7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.04■□□□□ 0.8
TBC1D28Q2M2D7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.04■□□□□ 0.8
TBC1D28Q2M2D7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TBC1D28Q2M2D7 AL022069.1-201ENST00000568025 1636 ntBASIC20.04■□□□□ 0.8
TBC1D28Q2M2D7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TBC1D28Q2M2D7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.03■□□□□ 0.8
TBC1D28Q2M2D7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TBC1D28Q2M2D7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TBC1D28Q2M2D7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
TBC1D28Q2M2D7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TBC1D28Q2M2D7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TBC1D28Q2M2D7 AC239859.2-201ENST00000444165 318 ntBASIC20.03■□□□□ 0.8
TBC1D28Q2M2D7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.03■□□□□ 0.8
TBC1D28Q2M2D7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.03■□□□□ 0.8
TBC1D28Q2M2D7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.03■□□□□ 0.8
TBC1D28Q2M2D7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TBC1D28Q2M2D7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TBC1D28Q2M2D7 AC021242.3-201ENST00000607598 1377 ntBASIC20.03■□□□□ 0.8
TBC1D28Q2M2D7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TBC1D28Q2M2D7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TBC1D28Q2M2D7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TBC1D28Q2M2D7 AL161729.1-201ENST00000604104 1402 ntBASIC20.02■□□□□ 0.8
TBC1D28Q2M2D7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.02■□□□□ 0.8
TBC1D28Q2M2D7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
TBC1D28Q2M2D7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TBC1D28Q2M2D7 LINC01124-201ENST00000409786 2117 ntBASIC20.02■□□□□ 0.8
TBC1D28Q2M2D7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
TBC1D28Q2M2D7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TBC1D28Q2M2D7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TBC1D28Q2M2D7 AC141586.4-201ENST00000624558 1573 ntBASIC20.02■□□□□ 0.8
TBC1D28Q2M2D7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.02■□□□□ 0.8
TBC1D28Q2M2D7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.02■□□□□ 0.8
TBC1D28Q2M2D7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TBC1D28Q2M2D7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.02■□□□□ 0.79
TBC1D28Q2M2D7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
TBC1D28Q2M2D7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TBC1D28Q2M2D7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.01■□□□□ 0.79
TBC1D28Q2M2D7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.01■□□□□ 0.79
TBC1D28Q2M2D7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TBC1D28Q2M2D7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.01■□□□□ 0.79
TBC1D28Q2M2D7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20■□□□□ 0.79
TBC1D28Q2M2D7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TBC1D28Q2M2D7 AC135731.1-201ENST00000569415 2548 ntBASIC20■□□□□ 0.79
TBC1D28Q2M2D7 MIR4787-201ENST00000607364 84 ntBASIC20■□□□□ 0.79
TBC1D28Q2M2D7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
TBC1D28Q2M2D7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TBC1D28Q2M2D7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TBC1D28Q2M2D7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TBC1D28Q2M2D7 LINC00543-201ENST00000567234 1845 ntBASIC19.98■□□□□ 0.79
TBC1D28Q2M2D7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TBC1D28Q2M2D7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TBC1D28Q2M2D7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TBC1D28Q2M2D7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.98■□□□□ 0.79
TBC1D28Q2M2D7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TBC1D28Q2M2D7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TBC1D28Q2M2D7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TBC1D28Q2M2D7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TBC1D28Q2M2D7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TBC1D28Q2M2D7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TBC1D28Q2M2D7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TBC1D28Q2M2D7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TBC1D28Q2M2D7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TBC1D28Q2M2D7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TBC1D28Q2M2D7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TBC1D28Q2M2D7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TBC1D28Q2M2D7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.97■□□□□ 0.79
TBC1D28Q2M2D7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.97■□□□□ 0.79
TBC1D28Q2M2D7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.97■□□□□ 0.79
TBC1D28Q2M2D7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TBC1D28Q2M2D7 AC131274.2-201ENST00000580697 1507 ntBASIC19.97■□□□□ 0.79
TBC1D28Q2M2D7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TBC1D28Q2M2D7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.96■□□□□ 0.79
TBC1D28Q2M2D7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TBC1D28Q2M2D7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TBC1D28Q2M2D7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms