Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.53■■□□□ 1.68
PEX3P56589 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PEX3P56589 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PEX3P56589 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC25.53■■□□□ 1.68
PEX3P56589 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.53■■□□□ 1.68
PEX3P56589 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.53■■□□□ 1.68
PEX3P56589 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PEX3P56589 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.52■■□□□ 1.68
PEX3P56589 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PEX3P56589 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
PEX3P56589 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.52■■□□□ 1.68
PEX3P56589 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
PEX3P56589 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC25.52■■□□□ 1.68
PEX3P56589 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.52■■□□□ 1.68
PEX3P56589 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PEX3P56589 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PEX3P56589 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
PEX3P56589 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.51■■□□□ 1.67
PEX3P56589 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
PEX3P56589 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC25.5■■□□□ 1.67
PEX3P56589 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
PEX3P56589 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.5■■□□□ 1.67
PEX3P56589 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PEX3P56589 AC131274.2-201ENST00000580697 1507 ntBASIC25.5■■□□□ 1.67
PEX3P56589 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.5■■□□□ 1.67
PEX3P56589 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
PEX3P56589 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PEX3P56589 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.49■■□□□ 1.67
PEX3P56589 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
PEX3P56589 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.49■■□□□ 1.67
PEX3P56589 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC25.49■■□□□ 1.67
PEX3P56589 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PEX3P56589 TSPY9P-201ENST00000440215 945 ntBASIC25.49■■□□□ 1.67
PEX3P56589 TSPY11P-201ENST00000442607 1045 ntBASIC25.49■■□□□ 1.67
PEX3P56589 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
PEX3P56589 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.49■■□□□ 1.67
PEX3P56589 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PEX3P56589 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.48■■□□□ 1.67
PEX3P56589 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PEX3P56589 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PEX3P56589 UNC93B8-201ENST00000511903 705 ntBASIC25.48■■□□□ 1.67
PEX3P56589 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.48■■□□□ 1.67
PEX3P56589 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.48■■□□□ 1.67
PEX3P56589 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.48■■□□□ 1.67
PEX3P56589 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PEX3P56589 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PEX3P56589 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
PEX3P56589 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.47■■□□□ 1.67
PEX3P56589 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
PEX3P56589 AL139125.2-201ENST00000623134 1869 ntBASIC25.47■■□□□ 1.67
PEX3P56589 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PEX3P56589 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PEX3P56589 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
PEX3P56589 SNX5-217ENST00000606557 1087 ntBASIC25.47■■□□□ 1.67
PEX3P56589 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
PEX3P56589 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
PEX3P56589 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PEX3P56589 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
PEX3P56589 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
PEX3P56589 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PEX3P56589 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.47■■□□□ 1.67
PEX3P56589 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.47■■□□□ 1.67
PEX3P56589 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PEX3P56589 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PEX3P56589 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PEX3P56589 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.46■■□□□ 1.67
PEX3P56589 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
PEX3P56589 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
PEX3P56589 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PEX3P56589 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC25.45■■□□□ 1.66
PEX3P56589 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.45■■□□□ 1.66
PEX3P56589 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.45■■□□□ 1.66
PEX3P56589 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PEX3P56589 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PEX3P56589 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PEX3P56589 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
PEX3P56589 AL022069.1-201ENST00000568025 1636 ntBASIC25.45■■□□□ 1.66
PEX3P56589 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PEX3P56589 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
PEX3P56589 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.44■■□□□ 1.66
PEX3P56589 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PEX3P56589 LINC01124-201ENST00000409786 2117 ntBASIC25.44■■□□□ 1.66
PEX3P56589 AC004448.1-201ENST00000458332 883 ntBASIC25.44■■□□□ 1.66
PEX3P56589 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.44■■□□□ 1.66
PEX3P56589 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
PEX3P56589 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PEX3P56589 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
PEX3P56589 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.43■■□□□ 1.66
PEX3P56589 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.43■■□□□ 1.66
PEX3P56589 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PEX3P56589 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
PEX3P56589 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.43■■□□□ 1.66
PEX3P56589 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.43■■□□□ 1.66
PEX3P56589 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
PEX3P56589 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
PEX3P56589 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PEX3P56589 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PEX3P56589 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PEX3P56589 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.42■■□□□ 1.66
PEX3P56589 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.42■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms