Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDX1P52945 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.45■■□□□ 1.18
PDX1P52945 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
PDX1P52945 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDX1P52945 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDX1P52945 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDX1P52945 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDX1P52945 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.44■■□□□ 1.18
PDX1P52945 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.44■■□□□ 1.18
PDX1P52945 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDX1P52945 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.44■■□□□ 1.18
PDX1P52945 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
PDX1P52945 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.44■■□□□ 1.18
PDX1P52945 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDX1P52945 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDX1P52945 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
PDX1P52945 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.43■■□□□ 1.18
PDX1P52945 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.43■■□□□ 1.18
PDX1P52945 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PDX1P52945 MIR6722-201ENST00000617286 78 ntBASIC22.43■■□□□ 1.18
PDX1P52945 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PDX1P52945 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PDX1P52945 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.42■■□□□ 1.18
PDX1P52945 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.42■■□□□ 1.18
PDX1P52945 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.42■■□□□ 1.18
PDX1P52945 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PDX1P52945 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDX1P52945 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDX1P52945 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDX1P52945 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDX1P52945 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PDX1P52945 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PDX1P52945 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDX1P52945 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PDX1P52945 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.41■■□□□ 1.18
PDX1P52945 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDX1P52945 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
PDX1P52945 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
PDX1P52945 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PDX1P52945 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.4■■□□□ 1.18
PDX1P52945 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PDX1P52945 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.39■■□□□ 1.18
PDX1P52945 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PDX1P52945 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.39■■□□□ 1.17
PDX1P52945 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.39■■□□□ 1.17
PDX1P52945 AC106739.1-201ENST00000617035 715 ntBASIC22.39■■□□□ 1.17
PDX1P52945 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
PDX1P52945 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
PDX1P52945 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
PDX1P52945 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.39■■□□□ 1.17
PDX1P52945 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDX1P52945 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDX1P52945 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.38■■□□□ 1.17
PDX1P52945 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.38■■□□□ 1.17
PDX1P52945 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDX1P52945 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDX1P52945 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.38■■□□□ 1.17
PDX1P52945 AC097639.1-201ENST00000565519 1891 ntBASIC22.38■■□□□ 1.17
PDX1P52945 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDX1P52945 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
PDX1P52945 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDX1P52945 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDX1P52945 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
PDX1P52945 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDX1P52945 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDX1P52945 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.36■■□□□ 1.17
PDX1P52945 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.36■■□□□ 1.17
PDX1P52945 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.36■■□□□ 1.17
PDX1P52945 ZNRF2P3-201ENST00000424200 374 ntBASIC22.36■■□□□ 1.17
PDX1P52945 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PDX1P52945 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.36■■□□□ 1.17
PDX1P52945 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDX1P52945 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDX1P52945 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDX1P52945 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDX1P52945 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
PDX1P52945 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
PDX1P52945 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDX1P52945 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.35■■□□□ 1.17
PDX1P52945 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
PDX1P52945 PBX2P1-201ENST00000493219 1291 ntBASIC22.35■■□□□ 1.17
PDX1P52945 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.35■■□□□ 1.17
PDX1P52945 AL031432.3-201ENST00000607698 485 ntBASIC22.35■■□□□ 1.17
PDX1P52945 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PDX1P52945 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.34■■□□□ 1.17
PDX1P52945 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.34■■□□□ 1.17
PDX1P52945 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
PDX1P52945 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDX1P52945 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.33■■□□□ 1.17
PDX1P52945 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PDX1P52945 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.33■■□□□ 1.17
PDX1P52945 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.33■■□□□ 1.17
PDX1P52945 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.16
PDX1P52945 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
PDX1P52945 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDX1P52945 UNC93B3-201ENST00000308076 687 ntBASIC22.32■■□□□ 1.16
PDX1P52945 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDX1P52945 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
PDX1P52945 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.32■■□□□ 1.16
PDX1P52945 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms