Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 ATXN3-208ENST00000504047 426 ntTSL 31.62□□□□□ -2.155e-7■■■■□ 25.1
NCBP2P52298 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.64■□□□□ 0.259e-8■■■■□ 25.1
NCBP2P52298 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.96■□□□□ 0.149e-8■■■■□ 25.1
NCBP2P52298 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.81□□□□□ -0.29e-8■■■■□ 25.1
NCBP2P52298 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.91□□□□□ -0.349e-8■■■■□ 25.1
NCBP2P52298 CAP2-207ENST00000493172 861 ntTSL 2 BASIC10.58□□□□□ -0.729e-8■■■■□ 25.1
NCBP2P52298 CAP2-201ENST00000229922 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.739e-8■■■■□ 25.1
NCBP2P52298 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.49■□□□□ 0.879e-7■■■■□ 25.1
NCBP2P52298 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.299e-7■■■■□ 25.1
NCBP2P52298 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.92■□□□□ 0.149e-7■■■■□ 25.1
NCBP2P52298 RPRD1A-211ENST00000592674 566 ntTSL 414.45□□□□□ -0.19e-7■■■■□ 25.1
NCBP2P52298 RPRD1A-208ENST00000589050 1022 ntTSL 1 (best)14.45□□□□□ -0.19e-7■■■■□ 25.1
NCBP2P52298 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.199e-7■■■■□ 25.1
NCBP2P52298 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.94■■□□□ 1.267e-9■■■■□ 25
NCBP2P52298 SNHG7-202ENST00000416970 789 ntTSL 1 (best)22.14■■□□□ 1.137e-9■■■■□ 25
NCBP2P52298 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.63■□□□□ 0.897e-9■■■■□ 25
NCBP2P52298 ZNF561-205ENST00000435550 566 ntTSL 514.39□□□□□ -0.112e-6■■■■□ 25
NCBP2P52298 ZNF561-203ENST00000421525 561 ntTSL 410.86□□□□□ -0.672e-6■■■■□ 25
NCBP2P52298 ZNF561-201ENST00000302851 4693 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.872e-6■■■■□ 25
NCBP2P52298 ZNF561-210ENST00000457965 659 ntTSL 59.27□□□□□ -0.932e-6■■■■□ 25
NCBP2P52298 ZNF561-202ENST00000326044 2017 ntTSL 2 BASIC9.09□□□□□ -0.952e-6■■■■□ 25
NCBP2P52298 ZNF561-208ENST00000444611 1031 ntTSL 28.74□□□□□ -1.012e-6■■■■□ 25
NCBP2P52298 ZNF561-207ENST00000444519 578 ntTSL 38.74□□□□□ -1.012e-6■■■■□ 25
NCBP2P52298 ZNF561-209ENST00000444802 912 ntTSL 57.77□□□□□ -1.172e-6■■■■□ 25
NCBP2P52298 ZNF561-213ENST00000471053 581 ntTSL 47.62□□□□□ -1.192e-6■■■■□ 25
NCBP2P52298 ZNF561-215ENST00000480167 494 ntTSL 37.4□□□□□ -1.222e-6■■■■□ 25
NCBP2P52298 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.03□□□□□ -1.282e-6■■■■□ 25
NCBP2P52298 ZNF561-218ENST00000490893 728 ntTSL 36.99□□□□□ -1.292e-6■■■■□ 25
NCBP2P52298 ZNF561-217ENST00000485150 326 ntTSL 26.86□□□□□ -1.312e-6■■■■□ 25
NCBP2P52298 ZNF561-220ENST00000495503 880 ntTSL 36.3□□□□□ -1.42e-6■■■■□ 25
NCBP2P52298 ZNF561-214ENST00000479943 462 ntTSL 35.38□□□□□ -1.552e-6■■■■□ 25
NCBP2P52298 ZNF561-221ENST00000497409 555 ntTSL 25.26□□□□□ -1.572e-6■■■■□ 25
NCBP2P52298 ZNF561-206ENST00000443819 956 ntTSL 55.08□□□□□ -1.62e-6■■■■□ 25
NCBP2P52298 ZNF561-212ENST00000470932 555 ntTSL 44.05□□□□□ -1.762e-6■■■■□ 25
NCBP2P52298 ZNF561-211ENST00000465974 625 ntTSL 21.96□□□□□ -2.12e-6■■■■□ 25
NCBP2P52298 THAP9-AS1-202ENST00000504520 2770 ntTSL 1 (best) BASIC11.51□□□□□ -0.572e-9■■■■□ 24.9
NCBP2P52298 THAP9-AS1-207ENST00000507660 550 ntTSL 39.51□□□□□ -0.893e-6■■■■□ 24.9
NCBP2P52298 THAP9-AS1-208ENST00000508772 566 ntTSL 49.27□□□□□ -0.932e-9■■■■□ 24.9
NCBP2P52298 THAP9-AS1-209ENST00000509007 566 ntTSL 49.27□□□□□ -0.933e-6■■■■□ 24.9
NCBP2P52298 THAP9-AS1-212ENST00000513581 683 ntTSL 29.27□□□□□ -0.933e-6■■■■□ 24.9
NCBP2P52298 SEC31A-218ENST00000506495 541 ntTSL 49.27□□□□□ -0.932e-9■■■■□ 24.9
NCBP2P52298 THAP9-AS1-201ENST00000503704 637 ntTSL 29.27□□□□□ -0.933e-6■■■■□ 24.9
NCBP2P52298 THAP9-AS1-204ENST00000504792 2577 ntTSL 2 BASIC8.65□□□□□ -1.032e-9■■■■□ 24.9
NCBP2P52298 SEC31A-220ENST00000507051 458 ntTSL 48.32□□□□□ -1.082e-9■■■■□ 24.9
NCBP2P52298 THAP9-AS1-205ENST00000504869 535 ntTSL 47.79□□□□□ -1.163e-6■■■■□ 24.9
NCBP2P52298 THAP9-AS1-210ENST00000511271 516 ntTSL 27.79□□□□□ -1.162e-9■■■■□ 24.9
NCBP2P52298 SEC31A-222ENST00000507676 551 ntTSL 46.94□□□□□ -1.32e-9■■■■□ 24.9
NCBP2P52298 THAP9-AS1-211ENST00000512932 971 ntTSL 26.89□□□□□ -1.312e-9■■■■□ 24.9
NCBP2P52298 SEC31A-211ENST00000503210 553 ntTSL 46.7□□□□□ -1.342e-9■■■■□ 24.9
NCBP2P52298 THAP9-AS1-206ENST00000505028 552 ntTSL 46.38□□□□□ -1.393e-6■■■■□ 24.9
NCBP2P52298 THAP9-AS1-203ENST00000504718 573 ntTSL 46□□□□□ -1.453e-6■■■■□ 24.9
NCBP2P52298 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.32□□□□□ -1.562e-9■■■■□ 24.9
NCBP2P52298 BCL2L1-205ENST00000422920 1157 ntTSL 222.97■■□□□ 1.272e-14■■■■□ 24.9
NCBP2P52298 BCL2L1-208ENST00000450273 894 ntTSL 316.44■□□□□ 0.222e-14■■■■□ 24.9
NCBP2P52298 BCL2L1-209ENST00000456404 914 ntTSL 215.98■□□□□ 0.152e-14■■■■□ 24.9
NCBP2P52298 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.372e-14■■■■□ 24.9
NCBP2P52298 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC12.59□□□□□ -0.392e-14■■■■□ 24.9
NCBP2P52298 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.432e-14■■■■□ 24.9
NCBP2P52298 BCL2L1-207ENST00000439267 781 ntTSL 210.88□□□□□ -0.672e-14■■■■□ 24.9
NCBP2P52298 BCL2L1-204ENST00000420488 820 ntTSL 29.6□□□□□ -0.872e-14■■■■□ 24.9
NCBP2P52298 BCL2L1-206ENST00000434194 381 ntTSL 36.78□□□□□ -1.322e-14■■■■□ 24.9
NCBP2P52298 TEPSIN-202ENST00000570854 849 ntTSL 320.35■□□□□ 0.859e-7■■■■□ 24.8
NCBP2P52298 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.479e-7■■■■□ 24.8
NCBP2P52298 GGT7-202ENST00000427420 615 ntTSL 217.88■□□□□ 0.459e-7■■■■□ 24.8
NCBP2P52298 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.449e-7■■■■□ 24.8
NCBP2P52298 TEPSIN-206ENST00000572050 568 ntTSL 317.29■□□□□ 0.369e-7■■■■□ 24.8
NCBP2P52298 TEPSIN-210ENST00000575891 556 ntTSL 416.6■□□□□ 0.259e-7■■■■□ 24.8
NCBP2P52298 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.199e-7■■■■□ 24.8
NCBP2P52298 TEPSIN-211ENST00000575961 564 ntTSL 416.11■□□□□ 0.179e-7■■■■□ 24.8
NCBP2P52298 TEPSIN-207ENST00000573295 2552 ntTSL 215.54■□□□□ 0.089e-7■■■■□ 24.8
NCBP2P52298 TEPSIN-205ENST00000571601 710 ntTSL 215.24■□□□□ 0.039e-7■■■■□ 24.8
NCBP2P52298 TACC2-229ENST00000515603 9101 ntTSL 1 (best) BASIC11.08□□□□□ -0.649e-7■■■■□ 24.8
NCBP2P52298 TACC2-228ENST00000515273 9245 ntTSL 1 (best) BASIC10.44□□□□□ -0.749e-7■■■■□ 24.8
NCBP2P52298 TACC2-202ENST00000334433 9377 ntTSL 5 BASIC10.03□□□□□ -0.89e-7■■■■□ 24.8
NCBP2P52298 TACC2-212ENST00000453444 9158 ntTSL 5 BASIC10.03□□□□□ -0.89e-7■■■■□ 24.8
NCBP2P52298 TACC2-210ENST00000369005 9673 ntTSL 1 (best) BASIC9.73□□□□□ -0.859e-7■■■■□ 24.8
NCBP2P52298 TACC2-203ENST00000358010 3815 ntTSL 5 BASIC9.55□□□□□ -0.889e-7■■■■□ 24.8
NCBP2P52298 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC8.27□□□□□ -1.089e-7■■■■□ 24.8
NCBP2P52298 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.086e-7■■■■□ 24.8
NCBP2P52298 AFF4-203ENST00000378595 3348 ntTSL 1 (best) BASIC11.29□□□□□ -0.66e-7■■■■□ 24.8
NCBP2P52298 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC6.89□□□□□ -1.316e-7■■■■□ 24.8
NCBP2P52298 GLG1-209ENST00000565260 461 ntTSL 524.61■■□□□ 1.532e-6■■■■□ 24.8
NCBP2P52298 TRIM52-AS1-204ENST00000514146 807 ntTSL 224.22■■□□□ 1.472e-6■■■■□ 24.8
NCBP2P52298 MXD3-205ENST00000503473 2279 ntTSL 524.17■■□□□ 1.463e-7■■■■□ 24.8
NCBP2P52298 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.46■■□□□ 1.352e-6■■■■□ 24.8
NCBP2P52298 MXD3-207ENST00000509339 579 ntTSL 322.55■■□□□ 1.23e-7■■■■□ 24.8
NCBP2P52298 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.17■■□□□ 1.142e-6■■■■□ 24.8
NCBP2P52298 RAB24-207ENST00000495458 1608 ntTSL 220.27■□□□□ 0.833e-7■■■■□ 24.8
NCBP2P52298 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.83e-7■■■■□ 24.8
NCBP2P52298 RAB24-206ENST00000478234 1820 ntTSL 219.98■□□□□ 0.793e-7■■■■□ 24.8
NCBP2P52298 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.92■□□□□ 0.783e-7■■■■□ 24.8
NCBP2P52298 RAB24-205ENST00000471466 1642 ntTSL 519.4■□□□□ 0.73e-7■■■■□ 24.8
NCBP2P52298 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.98■□□□□ 0.632e-6■■■■□ 24.8
NCBP2P52298 RAB24-208ENST00000504395 563 ntTSL 418.92■□□□□ 0.623e-7■■■■□ 24.8
NCBP2P52298 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.562e-6■■■■□ 24.8
NCBP2P52298 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.56■□□□□ 0.562e-6■■■■□ 24.8
NCBP2P52298 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.29■□□□□ 0.522e-6■■■■□ 24.8
NCBP2P52298 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.512e-6■■■■□ 24.8
NCBP2P52298 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.07■□□□□ 0.482e-6■■■■□ 24.8
NCBP2P52298 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.452e-6■■■■□ 24.8
Retrieved 100 of 18,329 protein–RNA pairs in 189.4 ms