Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SLC6A11P48066 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SLC6A11P48066 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.67■■□□□ 1.38
SLC6A11P48066 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SLC6A11P48066 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SLC6A11P48066 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SLC6A11P48066 UNC93B3-201ENST00000308076 687 ntBASIC23.66■■□□□ 1.38
SLC6A11P48066 PBX2P1-201ENST00000493219 1291 ntBASIC23.66■■□□□ 1.38
SLC6A11P48066 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.66■■□□□ 1.38
SLC6A11P48066 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.66■■□□□ 1.38
SLC6A11P48066 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
SLC6A11P48066 AC131274.2-201ENST00000580697 1507 ntBASIC23.65■■□□□ 1.38
SLC6A11P48066 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SLC6A11P48066 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SLC6A11P48066 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SLC6A11P48066 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.64■■□□□ 1.38
SLC6A11P48066 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.64■■□□□ 1.37
SLC6A11P48066 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
SLC6A11P48066 AC133561.4-201ENST00000566112 224 ntBASIC23.64■■□□□ 1.37
SLC6A11P48066 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.64■■□□□ 1.37
SLC6A11P48066 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SLC6A11P48066 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.37
SLC6A11P48066 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.64■■□□□ 1.37
SLC6A11P48066 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.64■■□□□ 1.37
SLC6A11P48066 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
SLC6A11P48066 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SLC6A11P48066 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SLC6A11P48066 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
SLC6A11P48066 AC106739.1-201ENST00000617035 715 ntBASIC23.63■■□□□ 1.37
SLC6A11P48066 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SLC6A11P48066 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLC6A11P48066 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SLC6A11P48066 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLC6A11P48066 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SLC6A11P48066 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.62■■□□□ 1.37
SLC6A11P48066 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLC6A11P48066 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.62■■□□□ 1.37
SLC6A11P48066 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SLC6A11P48066 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SLC6A11P48066 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SLC6A11P48066 AC005703.6-201ENST00000623265 1329 ntBASIC23.61■■□□□ 1.37
SLC6A11P48066 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLC6A11P48066 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SLC6A11P48066 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
SLC6A11P48066 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SLC6A11P48066 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
SLC6A11P48066 AC145676.1-201ENST00000514988 2004 ntBASIC23.6■■□□□ 1.37
SLC6A11P48066 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SLC6A11P48066 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SLC6A11P48066 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.6■■□□□ 1.37
SLC6A11P48066 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.6■■□□□ 1.37
SLC6A11P48066 SRD5A1P1-201ENST00000442297 786 ntBASIC23.6■■□□□ 1.37
SLC6A11P48066 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.6■■□□□ 1.37
SLC6A11P48066 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.6■■□□□ 1.37
SLC6A11P48066 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.6■■□□□ 1.37
SLC6A11P48066 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
SLC6A11P48066 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.59■■□□□ 1.37
SLC6A11P48066 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
SLC6A11P48066 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SLC6A11P48066 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.59■■□□□ 1.37
SLC6A11P48066 AL136162.1-201ENST00000607711 1078 ntBASIC23.59■■□□□ 1.37
SLC6A11P48066 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
SLC6A11P48066 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.59■■□□□ 1.37
SLC6A11P48066 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.59■■□□□ 1.37
SLC6A11P48066 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC6A11P48066 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC6A11P48066 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.59■■□□□ 1.37
SLC6A11P48066 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.59■■□□□ 1.37
SLC6A11P48066 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
SLC6A11P48066 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SLC6A11P48066 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.58■■□□□ 1.37
SLC6A11P48066 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.58■■□□□ 1.37
SLC6A11P48066 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SLC6A11P48066 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
SLC6A11P48066 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SLC6A11P48066 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.36
SLC6A11P48066 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.57■■□□□ 1.36
SLC6A11P48066 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
SLC6A11P48066 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SLC6A11P48066 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
SLC6A11P48066 MIR6089-201ENST00000616698 64 ntBASIC23.57■■□□□ 1.36
SLC6A11P48066 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.57■■□□□ 1.36
SLC6A11P48066 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.57■■□□□ 1.36
SLC6A11P48066 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.56■■□□□ 1.36
SLC6A11P48066 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SLC6A11P48066 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SLC6A11P48066 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.56■■□□□ 1.36
SLC6A11P48066 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SLC6A11P48066 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.56■■□□□ 1.36
SLC6A11P48066 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.55■■□□□ 1.36
SLC6A11P48066 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.55■■□□□ 1.36
SLC6A11P48066 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SLC6A11P48066 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SLC6A11P48066 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SLC6A11P48066 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SLC6A11P48066 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.54■■□□□ 1.36
SLC6A11P48066 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
SLC6A11P48066 AC024257.2-201ENST00000549699 147 ntBASIC23.54■■□□□ 1.36
SLC6A11P48066 AL031432.3-201ENST00000607698 485 ntBASIC23.54■■□□□ 1.36
SLC6A11P48066 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms