Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 YMR105W-AYMR105W-A 195 nt6.08□□□□□ -1.44
RTR1P40084 GCN20YFR009W 2259 nt6.08□□□□□ -1.44
RTR1P40084 SED4YCR067C 3198 nt6.07□□□□□ -1.44
RTR1P40084 ELP2YGR200C 2367 nt6.07□□□□□ -1.44
RTR1P40084 AAD4YDL243C 990 nt6.07□□□□□ -1.44
RTR1P40084 CTR2YHR175W 570 nt6.07□□□□□ -1.44
RTR1P40084 APS1YLR170C 471 nt6.07□□□□□ -1.44
RTR1P40084 YPL041CYPL041C 624 nt6.07□□□□□ -1.44
RTR1P40084 PAP2YOL115W 1755 nt6.06□□□□□ -1.44
RTR1P40084 PSY4YBL046W 1326 nt6.06□□□□□ -1.44
RTR1P40084 CAB1YDR531W 1104 nt6.06□□□□□ -1.44
RTR1P40084 MRPL39YML009C 213 nt6.06□□□□□ -1.44
RTR1P40084 YPL191CYPL191C 1083 nt6.06□□□□□ -1.44
RTR1P40084 UBA3YPR066W 900 nt6.06□□□□□ -1.44
RTR1P40084 GRS1YBR121C 2004 nt6.06□□□□□ -1.44
RTR1P40084 GMC1YDR506C 1827 nt6.05□□□□□ -1.44
RTR1P40084 MAK32YCR019W 1092 nt6.05□□□□□ -1.44
RTR1P40084 YGR153WYGR153W 654 nt6.05□□□□□ -1.44
RTR1P40084 YLR296WYLR296W 327 nt6.05□□□□□ -1.44
RTR1P40084 ARG8YOL140W 1272 nt6.05□□□□□ -1.44
RTR1P40084 BUD7YOR299W 2241 nt6.05□□□□□ -1.44
RTR1P40084 YDL027CYDL027C 1263 nt6.04□□□□□ -1.44
RTR1P40084 YJL193WYJL193W 1209 nt6.04□□□□□ -1.44
RTR1P40084 PUT1YLR142W 1431 nt6.04□□□□□ -1.44
RTR1P40084 NUP116YMR047C 3342 nt6.04□□□□□ -1.44
RTR1P40084 TFC6YDR362C 2019 nt6.04□□□□□ -1.44
RTR1P40084 RGT1YKL038W 3513 nt6.04□□□□□ -1.44
RTR1P40084 HXK2YGL253W 1461 nt6.03□□□□□ -1.44
RTR1P40084 GAT3YLR013W 426 nt6.03□□□□□ -1.44
RTR1P40084 YAR019W-AYAR019W-A 333 nt6.03□□□□□ -1.44
RTR1P40084 RRP3YHR065C 1506 nt6.03□□□□□ -1.44
RTR1P40084 OPT1YJL212C 2400 nt6.03□□□□□ -1.44
RTR1P40084 SRV2YNL138W 1581 nt6.02□□□□□ -1.45
RTR1P40084 ATM1YMR301C 2073 nt6.02□□□□□ -1.45
RTR1P40084 YIR007WYIR007W 2295 nt6.01□□□□□ -1.45
RTR1P40084 YIF1YNL263C 945 nt6.01□□□□□ -1.45
RTR1P40084 TFB4YPR056W 1017 nt6.01□□□□□ -1.45
RTR1P40084 VPS1YKR001C 2115 nt6.01□□□□□ -1.45
RTR1P40084 UBX2YML013W 1755 nt6.01□□□□□ -1.45
RTR1P40084 IMA2YOL157C 1770 nt6.01□□□□□ -1.45
RTR1P40084 PRM1YNL279W 1986 nt6□□□□□ -1.45
RTR1P40084 RDL2YOR286W 450 nt6□□□□□ -1.45
RTR1P40084 YPR169W-AYPR169W-A 219 nt6□□□□□ -1.45
RTR1P40084 YPR170W-BYPR170W-B 258 nt6□□□□□ -1.45
RTR1P40084 STE7YDL159W 1548 nt5.99□□□□□ -1.45
RTR1P40084 ASN1YPR145W 1719 nt5.99□□□□□ -1.45
RTR1P40084 APM2YHL019C 1818 nt5.99□□□□□ -1.45
RTR1P40084 IMD3YLR432W 1572 nt5.99□□□□□ -1.45
RTR1P40084 YDL121CYDL121C 450 nt5.99□□□□□ -1.45
RTR1P40084 NTH2YBR001C 2343 nt5.99□□□□□ -1.45
RTR1P40084 LDB19YOR322C 2457 nt5.99□□□□□ -1.45
RTR1P40084 SWI3YJL176C 2478 nt5.98□□□□□ -1.45
RTR1P40084 YBL006W-AYBL006W-A 150 nt5.98□□□□□ -1.45
RTR1P40084 FRE3YOR381W 2136 nt5.98□□□□□ -1.45
RTR1P40084 PRO2YOR323C 1371 nt5.97□□□□□ -1.45
RTR1P40084 LAS21YJL062W 2493 nt5.97□□□□□ -1.45
RTR1P40084 PAD1YDR538W 729 nt5.97□□□□□ -1.45
RTR1P40084 YEL067CYEL067C 588 nt5.97□□□□□ -1.45
RTR1P40084 YER187WYER187W 426 nt5.97□□□□□ -1.45
RTR1P40084 SLZ1YNL196C 897 nt5.97□□□□□ -1.45
RTR1P40084 ALT2YDR111C 1524 nt5.97□□□□□ -1.45
RTR1P40084 KAR2YJL034W 2049 nt5.97□□□□□ -1.45
RTR1P40084 YEF1YEL041W 1488 nt5.96□□□□□ -1.45
RTR1P40084 RAD30YDR419W 1899 nt5.96□□□□□ -1.45
RTR1P40084 PCS60YBR222C 1632 nt5.96□□□□□ -1.45
RTR1P40084 CHL4YDR254W 1377 nt5.96□□□□□ -1.45
RTR1P40084 LPL1YOR059C 1353 nt5.96□□□□□ -1.45
RTR1P40084 SUP35YDR172W 2058 nt5.96□□□□□ -1.46
RTR1P40084 YDL023CYDL023C 321 nt5.96□□□□□ -1.46
RTR1P40084 ATG14YBR128C 1035 nt5.96□□□□□ -1.46
RTR1P40084 SYP1YCR030C 2613 nt5.95□□□□□ -1.46
RTR1P40084 HSP31YDR533C 714 nt5.95□□□□□ -1.46
RTR1P40084 YLF2YHL014C 1218 nt5.95□□□□□ -1.46
RTR1P40084 YKL023WYKL023W 834 nt5.95□□□□□ -1.46
RTR1P40084 FUM1YPL262W 1467 nt5.95□□□□□ -1.46
RTR1P40084 APC4YDR118W 1959 nt5.95□□□□□ -1.46
RTR1P40084 RVB1YDR190C 1392 nt5.94□□□□□ -1.46
RTR1P40084 SCS2YER120W 735 nt5.94□□□□□ -1.46
RTR1P40084 NMA1YLR328W 1206 nt5.94□□□□□ -1.46
RTR1P40084 ACS2YLR153C 2052 nt5.94□□□□□ -1.46
RTR1P40084 DUG1YFR044C 1446 nt5.93□□□□□ -1.46
RTR1P40084 AIF1YNR074C 1137 nt5.93□□□□□ -1.46
RTR1P40084 YCL012CYCL012C 405 nt5.93□□□□□ -1.46
RTR1P40084 DNF2YDR093W 4839 nt5.93□□□□□ -1.46
RTR1P40084 SRP101YDR292C 1866 nt5.93□□□□□ -1.46
RTR1P40084 RCK1YGL158W 1539 nt5.93□□□□□ -1.46
RTR1P40084 FRS1YLR060W 1788 nt5.93□□□□□ -1.46
RTR1P40084 YMR196WYMR196W 3267 nt5.92□□□□□ -1.46
RTR1P40084 SUT1YGL162W 900 nt5.92□□□□□ -1.46
RTR1P40084 RPL43BYJR094W-A 279 nt5.92□□□□□ -1.46
RTR1P40084 SAP30YMR263W 606 nt5.92□□□□□ -1.46
RTR1P40084 GSP2YOR185C 663 nt5.92□□□□□ -1.46
RTR1P40084 HST2YPL015C 1074 nt5.92□□□□□ -1.46
RTR1P40084 CDC28YBR160W 897 nt5.92□□□□□ -1.46
RTR1P40084 YIL171W-AYIL171W-A 453 nt5.91□□□□□ -1.46
RTR1P40084 YJL220WYJL220W 453 nt5.91□□□□□ -1.46
RTR1P40084 snR17bsnR17b 332 nt5.91□□□□□ -1.46
RTR1P40084 HIR2YOR038C 2628 nt5.91□□□□□ -1.46
RTR1P40084 RTC5YOR118W 1704 nt5.91□□□□□ -1.46
RTR1P40084 UBA1YKL210W 3075 nt5.9□□□□□ -1.46
Retrieved 100 of 7,029 protein–RNA pairs in 21.3 ms