Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
HMGCLP35914 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HMGCLP35914 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
HMGCLP35914 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
HMGCLP35914 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HMGCLP35914 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
HMGCLP35914 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.09■■□□□ 1.29
HMGCLP35914 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.09■■□□□ 1.29
HMGCLP35914 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.09■■□□□ 1.29
HMGCLP35914 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
HMGCLP35914 AC021242.3-201ENST00000607598 1377 ntBASIC23.09■■□□□ 1.29
HMGCLP35914 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.09■■□□□ 1.29
HMGCLP35914 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HMGCLP35914 AL161729.1-201ENST00000604104 1402 ntBASIC23.08■■□□□ 1.29
HMGCLP35914 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HMGCLP35914 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
HMGCLP35914 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
HMGCLP35914 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
HMGCLP35914 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HMGCLP35914 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.08■■□□□ 1.29
HMGCLP35914 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
HMGCLP35914 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
HMGCLP35914 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
HMGCLP35914 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
HMGCLP35914 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HMGCLP35914 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HMGCLP35914 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.07■■□□□ 1.28
HMGCLP35914 AL022069.1-201ENST00000568025 1636 ntBASIC23.07■■□□□ 1.28
HMGCLP35914 AC131274.2-201ENST00000580697 1507 ntBASIC23.07■■□□□ 1.28
HMGCLP35914 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.07■■□□□ 1.28
HMGCLP35914 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.06■■□□□ 1.28
HMGCLP35914 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.06■■□□□ 1.28
HMGCLP35914 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.06■■□□□ 1.28
HMGCLP35914 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.06■■□□□ 1.28
HMGCLP35914 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
HMGCLP35914 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HMGCLP35914 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
HMGCLP35914 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
HMGCLP35914 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
HMGCLP35914 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HMGCLP35914 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
HMGCLP35914 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
HMGCLP35914 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.05■■□□□ 1.28
HMGCLP35914 AL035685.1-201ENST00000636663 812 ntBASIC23.05■■□□□ 1.28
HMGCLP35914 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
HMGCLP35914 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HMGCLP35914 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
HMGCLP35914 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
HMGCLP35914 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.04■■□□□ 1.28
HMGCLP35914 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.04■■□□□ 1.28
HMGCLP35914 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
HMGCLP35914 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.04■■□□□ 1.28
HMGCLP35914 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.04■■□□□ 1.28
HMGCLP35914 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HMGCLP35914 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
HMGCLP35914 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
HMGCLP35914 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HMGCLP35914 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
HMGCLP35914 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HMGCLP35914 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HMGCLP35914 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.03■■□□□ 1.28
HMGCLP35914 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.03■■□□□ 1.28
HMGCLP35914 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.03■■□□□ 1.28
HMGCLP35914 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
HMGCLP35914 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.02■■□□□ 1.28
HMGCLP35914 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.02■■□□□ 1.28
HMGCLP35914 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
HMGCLP35914 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.02■■□□□ 1.28
HMGCLP35914 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.02■■□□□ 1.28
HMGCLP35914 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
HMGCLP35914 KRT125P-201ENST00000546827 989 ntBASIC23.02■■□□□ 1.28
HMGCLP35914 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.02■■□□□ 1.28
HMGCLP35914 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
HMGCLP35914 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HMGCLP35914 AC093323.1-202ENST00000635031 2045 ntBASIC23.01■■□□□ 1.27
HMGCLP35914 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
HMGCLP35914 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
HMGCLP35914 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.01■■□□□ 1.27
HMGCLP35914 AC239859.2-201ENST00000444165 318 ntBASIC23.01■■□□□ 1.27
HMGCLP35914 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.01■■□□□ 1.27
HMGCLP35914 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
HMGCLP35914 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
HMGCLP35914 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HMGCLP35914 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HMGCLP35914 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23■■□□□ 1.27
HMGCLP35914 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
HMGCLP35914 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
HMGCLP35914 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23■■□□□ 1.27
HMGCLP35914 AC004448.1-201ENST00000458332 883 ntBASIC23■■□□□ 1.27
HMGCLP35914 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HMGCLP35914 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HMGCLP35914 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23■■□□□ 1.27
HMGCLP35914 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
HMGCLP35914 AC004812.2-201ENST00000611079 2094 ntBASIC22.99■■□□□ 1.27
HMGCLP35914 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.99■■□□□ 1.27
HMGCLP35914 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
HMGCLP35914 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
HMGCLP35914 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
HMGCLP35914 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
HMGCLP35914 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms