Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CKS2P33552 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CKS2P33552 MIR219A2-201ENST00000608502 1504 ntBASIC16.93■□□□□ 0.3
CKS2P33552 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CKS2P33552 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC16.93■□□□□ 0.3
CKS2P33552 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC16.93■□□□□ 0.3
CKS2P33552 LINC00565-201ENST00000562710 2331 ntBASIC16.93■□□□□ 0.3
CKS2P33552 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CKS2P33552 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CKS2P33552 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC16.93■□□□□ 0.3
CKS2P33552 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CKS2P33552 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CKS2P33552 EP400NL-214ENST00000641289 2402 ntBASIC16.92■□□□□ 0.3
CKS2P33552 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKS2P33552 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CKS2P33552 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CKS2P33552 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC16.92■□□□□ 0.3
CKS2P33552 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC16.92■□□□□ 0.3
CKS2P33552 MIR6089-201ENST00000616698 64 ntBASIC16.92■□□□□ 0.3
CKS2P33552 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKS2P33552 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKS2P33552 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKS2P33552 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC16.92■□□□□ 0.3
CKS2P33552 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CKS2P33552 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.91■□□□□ 0.3
CKS2P33552 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CKS2P33552 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
CKS2P33552 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKS2P33552 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKS2P33552 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CKS2P33552 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CKS2P33552 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKS2P33552 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CKS2P33552 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CKS2P33552 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CKS2P33552 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CKS2P33552 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC16.9■□□□□ 0.3
CKS2P33552 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CKS2P33552 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CKS2P33552 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CKS2P33552 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CKS2P33552 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CKS2P33552 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CKS2P33552 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CKS2P33552 AC008813.1-201ENST00000536597 885 ntBASIC16.9■□□□□ 0.3
CKS2P33552 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC16.9■□□□□ 0.3
CKS2P33552 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CKS2P33552 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.9■□□□□ 0.3
CKS2P33552 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC16.9■□□□□ 0.3
CKS2P33552 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CKS2P33552 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CKS2P33552 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CKS2P33552 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
CKS2P33552 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CKS2P33552 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CKS2P33552 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.89■□□□□ 0.29
CKS2P33552 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CKS2P33552 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CKS2P33552 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CKS2P33552 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CKS2P33552 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CKS2P33552 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CKS2P33552 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CKS2P33552 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CKS2P33552 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CKS2P33552 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.88■□□□□ 0.29
CKS2P33552 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CKS2P33552 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CKS2P33552 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CKS2P33552 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CKS2P33552 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CKS2P33552 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC16.88■□□□□ 0.29
CKS2P33552 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.88■□□□□ 0.29
CKS2P33552 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CKS2P33552 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CKS2P33552 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CKS2P33552 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CKS2P33552 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CKS2P33552 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CKS2P33552 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CKS2P33552 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CKS2P33552 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CKS2P33552 AC148477.6-201ENST00000623746 465 ntBASIC16.87■□□□□ 0.29
CKS2P33552 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CKS2P33552 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CKS2P33552 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CKS2P33552 HLA-L-211ENST00000482052 1765 ntBASIC16.87■□□□□ 0.29
CKS2P33552 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC16.87■□□□□ 0.29
CKS2P33552 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CKS2P33552 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CKS2P33552 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CKS2P33552 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CKS2P33552 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CKS2P33552 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
CKS2P33552 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CKS2P33552 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CKS2P33552 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CKS2P33552 AC021231.2-201ENST00000594613 730 ntBASIC16.86■□□□□ 0.29
CKS2P33552 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
CKS2P33552 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms