Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SDHAP31040 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SDHAP31040 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SDHAP31040 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.66■□□□□ 0.9
SDHAP31040 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SDHAP31040 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
SDHAP31040 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SDHAP31040 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SDHAP31040 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SDHAP31040 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SDHAP31040 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SDHAP31040 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SDHAP31040 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SDHAP31040 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.65■□□□□ 0.9
SDHAP31040 AL161729.1-201ENST00000604104 1402 ntBASIC20.65■□□□□ 0.9
SDHAP31040 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SDHAP31040 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SDHAP31040 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SDHAP31040 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SDHAP31040 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SDHAP31040 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
SDHAP31040 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SDHAP31040 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.65■□□□□ 0.9
SDHAP31040 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SDHAP31040 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SDHAP31040 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SDHAP31040 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SDHAP31040 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SDHAP31040 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SDHAP31040 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SDHAP31040 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SDHAP31040 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.64■□□□□ 0.89
SDHAP31040 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SDHAP31040 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SDHAP31040 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SDHAP31040 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SDHAP31040 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SDHAP31040 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SDHAP31040 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SDHAP31040 DUSP8P5-201ENST00000422884 1815 ntBASIC20.63■□□□□ 0.89
SDHAP31040 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SDHAP31040 NTF6A-201ENST00000591175 560 ntBASIC20.63■□□□□ 0.89
SDHAP31040 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.63■□□□□ 0.89
SDHAP31040 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SDHAP31040 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.63■□□□□ 0.89
SDHAP31040 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SDHAP31040 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SDHAP31040 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SDHAP31040 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SDHAP31040 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SDHAP31040 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SDHAP31040 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SDHAP31040 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SDHAP31040 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SDHAP31040 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.62■□□□□ 0.89
SDHAP31040 AC019171.1-201ENST00000601251 1056 ntBASIC20.62■□□□□ 0.89
SDHAP31040 AC011551.1-201ENST00000614101 683 ntBASIC20.62■□□□□ 0.89
SDHAP31040 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.62■□□□□ 0.89
SDHAP31040 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SDHAP31040 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SDHAP31040 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.62■□□□□ 0.89
SDHAP31040 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
SDHAP31040 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.62■□□□□ 0.89
SDHAP31040 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.61■□□□□ 0.89
SDHAP31040 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SDHAP31040 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SDHAP31040 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
SDHAP31040 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.61■□□□□ 0.89
SDHAP31040 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SDHAP31040 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.61■□□□□ 0.89
SDHAP31040 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SDHAP31040 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SDHAP31040 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SDHAP31040 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SDHAP31040 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.61■□□□□ 0.89
SDHAP31040 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SDHAP31040 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SDHAP31040 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDHAP31040 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDHAP31040 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDHAP31040 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDHAP31040 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.6■□□□□ 0.89
SDHAP31040 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SDHAP31040 AC139795.1-202ENST00000500444 432 ntBASIC20.6■□□□□ 0.89
SDHAP31040 AC022616.5-201ENST00000518796 181 ntBASIC20.6■□□□□ 0.89
SDHAP31040 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDHAP31040 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SDHAP31040 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.6■□□□□ 0.89
SDHAP31040 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDHAP31040 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDHAP31040 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.6■□□□□ 0.89
SDHAP31040 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.6■□□□□ 0.89
SDHAP31040 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SDHAP31040 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDHAP31040 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDHAP31040 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SDHAP31040 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SDHAP31040 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SDHAP31040 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SDHAP31040 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms