Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LMO1P25800 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LMO1P25800 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LMO1P25800 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.44■□□□□ 0.7
LMO1P25800 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LMO1P25800 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LMO1P25800 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.44■□□□□ 0.7
LMO1P25800 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LMO1P25800 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.43■□□□□ 0.7
LMO1P25800 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LMO1P25800 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LMO1P25800 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
LMO1P25800 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LMO1P25800 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.43■□□□□ 0.7
LMO1P25800 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LMO1P25800 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LMO1P25800 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
LMO1P25800 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LMO1P25800 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LMO1P25800 AC004812.2-201ENST00000611079 2094 ntBASIC19.42■□□□□ 0.7
LMO1P25800 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LMO1P25800 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LMO1P25800 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.42■□□□□ 0.7
LMO1P25800 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LMO1P25800 AC011551.1-201ENST00000614101 683 ntBASIC19.42■□□□□ 0.7
LMO1P25800 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LMO1P25800 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LMO1P25800 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LMO1P25800 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.42■□□□□ 0.7
LMO1P25800 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMO1P25800 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMO1P25800 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
LMO1P25800 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMO1P25800 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMO1P25800 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.41■□□□□ 0.7
LMO1P25800 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.41■□□□□ 0.7
LMO1P25800 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
LMO1P25800 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.41■□□□□ 0.7
LMO1P25800 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LMO1P25800 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMO1P25800 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.41■□□□□ 0.7
LMO1P25800 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.41■□□□□ 0.7
LMO1P25800 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.41■□□□□ 0.7
LMO1P25800 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LMO1P25800 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.4■□□□□ 0.7
LMO1P25800 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMO1P25800 TSPY13P-201ENST00000338964 914 ntBASIC19.4■□□□□ 0.7
LMO1P25800 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LMO1P25800 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LMO1P25800 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMO1P25800 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LMO1P25800 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMO1P25800 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LMO1P25800 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
LMO1P25800 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LMO1P25800 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LMO1P25800 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.39■□□□□ 0.69
LMO1P25800 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LMO1P25800 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
LMO1P25800 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
LMO1P25800 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LMO1P25800 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.38■□□□□ 0.69
LMO1P25800 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LMO1P25800 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
LMO1P25800 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
LMO1P25800 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LMO1P25800 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LMO1P25800 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LMO1P25800 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LMO1P25800 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LMO1P25800 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
LMO1P25800 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.37■□□□□ 0.69
LMO1P25800 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LMO1P25800 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LMO1P25800 AL161729.1-201ENST00000604104 1402 ntBASIC19.37■□□□□ 0.69
LMO1P25800 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.37■□□□□ 0.69
LMO1P25800 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LMO1P25800 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.37■□□□□ 0.69
LMO1P25800 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
LMO1P25800 BHLHE23-202ENST00000612929 1109 ntBASIC19.37■□□□□ 0.69
LMO1P25800 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LMO1P25800 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LMO1P25800 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LMO1P25800 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LMO1P25800 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.36■□□□□ 0.69
LMO1P25800 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LMO1P25800 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
LMO1P25800 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.36■□□□□ 0.69
LMO1P25800 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.36■□□□□ 0.69
LMO1P25800 AC012354.3-201ENST00000623734 483 ntBASIC19.36■□□□□ 0.69
LMO1P25800 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LMO1P25800 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
LMO1P25800 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
LMO1P25800 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LMO1P25800 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LMO1P25800 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LMO1P25800 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LMO1P25800 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
LMO1P25800 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.35■□□□□ 0.69
LMO1P25800 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms