Protein–RNA interactions for Protein: P25440

BRD2, Bromodomain-containing protein 2, humanhuman

Known RBP Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2P25440 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
BRD2P25440 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
BRD2P25440 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
BRD2P25440 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
BRD2P25440 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
BRD2P25440 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.7■■□□□ 1.54
BRD2P25440 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.7■■□□□ 1.54
BRD2P25440 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.7■■□□□ 1.54
BRD2P25440 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
BRD2P25440 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.7■■□□□ 1.54
BRD2P25440 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
BRD2P25440 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
BRD2P25440 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
BRD2P25440 AL031848.2-201ENST00000607670 837 ntBASIC24.69■■□□□ 1.54
BRD2P25440 AC093323.1-202ENST00000635031 2045 ntBASIC24.69■■□□□ 1.54
BRD2P25440 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
BRD2P25440 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.69■■□□□ 1.54
BRD2P25440 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
BRD2P25440 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
BRD2P25440 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
BRD2P25440 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
BRD2P25440 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
BRD2P25440 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.68■■□□□ 1.54
BRD2P25440 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
BRD2P25440 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
BRD2P25440 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.68■■□□□ 1.54
BRD2P25440 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
BRD2P25440 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
BRD2P25440 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
BRD2P25440 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
BRD2P25440 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.67■■□□□ 1.54
BRD2P25440 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.67■■□□□ 1.54
BRD2P25440 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
BRD2P25440 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
BRD2P25440 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
BRD2P25440 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
BRD2P25440 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
BRD2P25440 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC24.66■■□□□ 1.54
BRD2P25440 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.66■■□□□ 1.54
BRD2P25440 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC24.66■■□□□ 1.54
BRD2P25440 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
BRD2P25440 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.66■■□□□ 1.54
BRD2P25440 LINC00543-201ENST00000567234 1845 ntBASIC24.65■■□□□ 1.54
BRD2P25440 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
BRD2P25440 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
BRD2P25440 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.65■■□□□ 1.54
BRD2P25440 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
BRD2P25440 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
BRD2P25440 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
BRD2P25440 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
BRD2P25440 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.64■■□□□ 1.54
BRD2P25440 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
BRD2P25440 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.63■■□□□ 1.53
BRD2P25440 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
BRD2P25440 TK2-216ENST00000564917 1156 ntTSL 3 BASIC24.63■■□□□ 1.53
BRD2P25440 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
BRD2P25440 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
BRD2P25440 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
BRD2P25440 AF131216.4-201ENST00000638924 1588 ntBASIC24.63■■□□□ 1.53
BRD2P25440 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC24.62■■□□□ 1.53
BRD2P25440 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.62■■□□□ 1.53
BRD2P25440 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
BRD2P25440 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
BRD2P25440 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
BRD2P25440 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC24.61■■□□□ 1.53
BRD2P25440 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
BRD2P25440 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
BRD2P25440 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
BRD2P25440 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.61■■□□□ 1.53
BRD2P25440 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
BRD2P25440 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
BRD2P25440 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
BRD2P25440 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.61■■□□□ 1.53
BRD2P25440 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.61■■□□□ 1.53
BRD2P25440 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC24.6■■□□□ 1.53
BRD2P25440 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
BRD2P25440 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
BRD2P25440 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
BRD2P25440 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
BRD2P25440 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
BRD2P25440 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
BRD2P25440 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
BRD2P25440 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
BRD2P25440 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
BRD2P25440 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
BRD2P25440 PRTG-204ENST00000561292 833 ntTSL 3 BASIC24.59■■□□□ 1.53
BRD2P25440 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
BRD2P25440 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
BRD2P25440 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.59■■□□□ 1.53
BRD2P25440 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
BRD2P25440 AC141586.4-201ENST00000624558 1573 ntBASIC24.59■■□□□ 1.53
BRD2P25440 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
BRD2P25440 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
BRD2P25440 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
BRD2P25440 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.58■■□□□ 1.53
BRD2P25440 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.58■■□□□ 1.53
BRD2P25440 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.58■■□□□ 1.53
BRD2P25440 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
BRD2P25440 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
BRD2P25440 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms