Protein–RNA interactions for Protein: P04435

TCRB, T-cell receptor beta chain V region CTL-L17, humanhuman

Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBP04435 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TCRBP04435 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TCRBP04435 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.66■□□□□ 0.74
TCRBP04435 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBP04435 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBP04435 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TCRBP04435 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBP04435 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBP04435 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TCRBP04435 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBP04435 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TCRBP04435 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TCRBP04435 PKD1P6-201ENST00000343738 4769 ntBASIC19.65■□□□□ 0.74
TCRBP04435 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TCRBP04435 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TCRBP04435 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.65■□□□□ 0.74
TCRBP04435 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TCRBP04435 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TCRBP04435 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.65■□□□□ 0.74
TCRBP04435 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
TCRBP04435 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TCRBP04435 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TCRBP04435 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TCRBP04435 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
TCRBP04435 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TCRBP04435 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TCRBP04435 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TCRBP04435 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TCRBP04435 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TCRBP04435 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TCRBP04435 SLC25A24-204ENST00000569674 2357 ntBASIC19.63■□□□□ 0.73
TCRBP04435 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
TCRBP04435 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TCRBP04435 DUSP8P3-201ENST00000399571 1760 ntBASIC19.63■□□□□ 0.73
TCRBP04435 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TCRBP04435 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TCRBP04435 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.63■□□□□ 0.73
TCRBP04435 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TCRBP04435 ANOS2P-203ENST00000472227 1816 ntBASIC19.62■□□□□ 0.73
TCRBP04435 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.62■□□□□ 0.73
TCRBP04435 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.62■□□□□ 0.73
TCRBP04435 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TCRBP04435 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TCRBP04435 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TCRBP04435 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TCRBP04435 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TCRBP04435 AL137060.1-201ENST00000618151 2648 ntBASIC19.62■□□□□ 0.73
TCRBP04435 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TCRBP04435 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TCRBP04435 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TCRBP04435 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TCRBP04435 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBP04435 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TCRBP04435 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBP04435 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBP04435 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.61■□□□□ 0.73
TCRBP04435 AC097358.2-201ENST00000607541 1159 ntBASIC19.61■□□□□ 0.73
TCRBP04435 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBP04435 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBP04435 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBP04435 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBP04435 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBP04435 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TCRBP04435 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.6■□□□□ 0.73
TCRBP04435 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
TCRBP04435 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.6■□□□□ 0.73
TCRBP04435 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
TCRBP04435 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.6■□□□□ 0.73
TCRBP04435 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.59■□□□□ 0.73
TCRBP04435 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TCRBP04435 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TCRBP04435 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TCRBP04435 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TCRBP04435 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.59■□□□□ 0.73
TCRBP04435 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TCRBP04435 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.59■□□□□ 0.73
TCRBP04435 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
TCRBP04435 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TCRBP04435 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TCRBP04435 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TCRBP04435 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TCRBP04435 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TCRBP04435 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TCRBP04435 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
TCRBP04435 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TCRBP04435 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TCRBP04435 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TCRBP04435 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TCRBP04435 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
TCRBP04435 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TCRBP04435 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TCRBP04435 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TCRBP04435 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBP04435 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBP04435 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBP04435 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBP04435 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBP04435 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
TCRBP04435 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBP04435 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms