Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 LINC00565-201ENST00000562710 2331 ntBASIC19.58■□□□□ 0.73
RAB3DO95716 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RAB3DO95716 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.58■□□□□ 0.73
RAB3DO95716 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB3DO95716 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB3DO95716 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.58■□□□□ 0.72
RAB3DO95716 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.58■□□□□ 0.72
RAB3DO95716 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.58■□□□□ 0.72
RAB3DO95716 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
RAB3DO95716 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.58■□□□□ 0.72
RAB3DO95716 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB3DO95716 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB3DO95716 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.58■□□□□ 0.72
RAB3DO95716 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB3DO95716 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
RAB3DO95716 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB3DO95716 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAB3DO95716 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB3DO95716 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.57■□□□□ 0.72
RAB3DO95716 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB3DO95716 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAB3DO95716 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RAB3DO95716 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RAB3DO95716 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.56■□□□□ 0.72
RAB3DO95716 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB3DO95716 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.56■□□□□ 0.72
RAB3DO95716 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB3DO95716 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3DO95716 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3DO95716 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RAB3DO95716 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3DO95716 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3DO95716 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3DO95716 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3DO95716 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.55■□□□□ 0.72
RAB3DO95716 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3DO95716 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3DO95716 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3DO95716 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RAB3DO95716 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.55■□□□□ 0.72
RAB3DO95716 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3DO95716 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3DO95716 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3DO95716 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RAB3DO95716 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RAB3DO95716 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3DO95716 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RAB3DO95716 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RAB3DO95716 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3DO95716 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3DO95716 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3DO95716 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3DO95716 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.53■□□□□ 0.72
RAB3DO95716 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3DO95716 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3DO95716 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3DO95716 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RAB3DO95716 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3DO95716 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3DO95716 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3DO95716 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3DO95716 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3DO95716 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.52■□□□□ 0.71
RAB3DO95716 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.51■□□□□ 0.71
RAB3DO95716 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
RAB3DO95716 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3DO95716 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RAB3DO95716 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3DO95716 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3DO95716 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3DO95716 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.51■□□□□ 0.71
RAB3DO95716 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.51■□□□□ 0.71
RAB3DO95716 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.51■□□□□ 0.71
RAB3DO95716 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3DO95716 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3DO95716 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RAB3DO95716 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
RAB3DO95716 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3DO95716 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3DO95716 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3DO95716 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RAB3DO95716 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3DO95716 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3DO95716 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3DO95716 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3DO95716 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
RAB3DO95716 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
RAB3DO95716 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3DO95716 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
RAB3DO95716 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB3DO95716 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.49■□□□□ 0.71
RAB3DO95716 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.49■□□□□ 0.71
RAB3DO95716 DUX4L11-201ENST00000611504 1267 ntBASIC19.49■□□□□ 0.71
RAB3DO95716 DUX4L12-201ENST00000614593 1267 ntBASIC19.49■□□□□ 0.71
RAB3DO95716 DUX4L14-201ENST00000621227 1267 ntBASIC19.49■□□□□ 0.71
RAB3DO95716 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RAB3DO95716 ANOS2P-203ENST00000472227 1816 ntBASIC19.48■□□□□ 0.71
RAB3DO95716 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RAB3DO95716 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3DO95716 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms