Protein–RNA interactions for Protein: O75626

PRDM1, PR domain zinc finger protein 1, humanhuman

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1O75626 MED17-227ENST00000640521 2047 ntTSL 5 BASIC27.4■■□□□ 1.98
PRDM1O75626 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
PRDM1O75626 LSM4-201ENST00000252816 986 ntTSL 2 BASIC27.39■■□□□ 1.98
PRDM1O75626 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
PRDM1O75626 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC27.39■■□□□ 1.98
PRDM1O75626 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
PRDM1O75626 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
PRDM1O75626 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
PRDM1O75626 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC27.39■■□□□ 1.97
PRDM1O75626 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
PRDM1O75626 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.97
PRDM1O75626 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
PRDM1O75626 AC135731.1-201ENST00000569415 2548 ntBASIC27.38■■□□□ 1.97
PRDM1O75626 HLA-L-211ENST00000482052 1765 ntBASIC27.38■■□□□ 1.97
PRDM1O75626 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
PRDM1O75626 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC27.38■■□□□ 1.97
PRDM1O75626 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PRDM1O75626 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
PRDM1O75626 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC27.37■■□□□ 1.97
PRDM1O75626 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PRDM1O75626 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
PRDM1O75626 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC27.37■■□□□ 1.97
PRDM1O75626 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PRDM1O75626 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PRDM1O75626 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC27.36■■□□□ 1.97
PRDM1O75626 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PRDM1O75626 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC27.36■■□□□ 1.97
PRDM1O75626 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC27.35■■□□□ 1.97
PRDM1O75626 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC27.35■■□□□ 1.97
PRDM1O75626 AC131274.2-201ENST00000580697 1507 ntBASIC27.35■■□□□ 1.97
PRDM1O75626 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
PRDM1O75626 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PRDM1O75626 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
PRDM1O75626 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
PRDM1O75626 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PRDM1O75626 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PRDM1O75626 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
PRDM1O75626 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC27.32■■□□□ 1.96
PRDM1O75626 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC27.32■■□□□ 1.96
PRDM1O75626 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
PRDM1O75626 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC27.32■■□□□ 1.96
PRDM1O75626 CLTA-206ENST00000466396 695 ntTSL 2 BASIC27.32■■□□□ 1.96
PRDM1O75626 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC27.32■■□□□ 1.96
PRDM1O75626 AC142381.3-201ENST00000568208 1670 ntBASIC27.32■■□□□ 1.96
PRDM1O75626 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
PRDM1O75626 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
PRDM1O75626 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PRDM1O75626 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC27.31■■□□□ 1.96
PRDM1O75626 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC27.31■■□□□ 1.96
PRDM1O75626 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC27.31■■□□□ 1.96
PRDM1O75626 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC27.31■■□□□ 1.96
PRDM1O75626 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC27.31■■□□□ 1.96
PRDM1O75626 EXOG-217ENST00000630638 197 ntTSL 5 BASIC27.31■■□□□ 1.96
PRDM1O75626 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
PRDM1O75626 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
PRDM1O75626 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
PRDM1O75626 CD72-202ENST00000378430 585 ntTSL 3 BASIC27.3■■□□□ 1.96
PRDM1O75626 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PRDM1O75626 TMEM202-AS1-202ENST00000565181 2325 ntBASIC27.3■■□□□ 1.96
PRDM1O75626 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
PRDM1O75626 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PRDM1O75626 AC004448.1-201ENST00000458332 883 ntBASIC27.29■■□□□ 1.96
PRDM1O75626 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC27.29■■□□□ 1.96
PRDM1O75626 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
PRDM1O75626 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC27.29■■□□□ 1.96
PRDM1O75626 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PRDM1O75626 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
PRDM1O75626 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PRDM1O75626 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
PRDM1O75626 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PRDM1O75626 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC27.28■■□□□ 1.96
PRDM1O75626 MIR6724-1-201ENST00000616420 92 ntBASIC27.28■■□□□ 1.96
PRDM1O75626 MIR6724-2-201ENST00000616483 92 ntBASIC27.28■■□□□ 1.96
PRDM1O75626 MIR6724-4-201ENST00000617390 92 ntBASIC27.28■■□□□ 1.96
PRDM1O75626 MIR6724-3-201ENST00000622482 92 ntBASIC27.28■■□□□ 1.96
PRDM1O75626 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
PRDM1O75626 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
PRDM1O75626 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
PRDM1O75626 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC27.27■■□□□ 1.96
PRDM1O75626 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PRDM1O75626 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC27.27■■□□□ 1.96
PRDM1O75626 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PRDM1O75626 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PRDM1O75626 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PRDM1O75626 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PRDM1O75626 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC27.26■■□□□ 1.95
PRDM1O75626 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PRDM1O75626 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC27.26■■□□□ 1.95
PRDM1O75626 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC27.26■■□□□ 1.95
PRDM1O75626 LSM7-203ENST00000585409 512 ntTSL 2 BASIC27.26■■□□□ 1.95
PRDM1O75626 AL117332.1-201ENST00000622628 974 ntBASIC27.26■■□□□ 1.95
PRDM1O75626 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC27.26■■□□□ 1.95
PRDM1O75626 AP003733.4-201ENST00000623785 1697 ntBASIC27.26■■□□□ 1.95
PRDM1O75626 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
PRDM1O75626 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PRDM1O75626 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PRDM1O75626 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
PRDM1O75626 TRIR-202ENST00000588213 841 ntTSL 3 BASIC27.25■■□□□ 1.95
PRDM1O75626 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
PRDM1O75626 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC27.25■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms