Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
HCN1O60741 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HCN1O60741 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.46■■□□□ 1.03
HCN1O60741 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HCN1O60741 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
HCN1O60741 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HCN1O60741 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.46■■□□□ 1.03
HCN1O60741 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.46■■□□□ 1.03
HCN1O60741 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
HCN1O60741 AC133561.1-201ENST00000568600 2415 ntBASIC21.46■■□□□ 1.03
HCN1O60741 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.03
HCN1O60741 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HCN1O60741 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.45■■□□□ 1.02
HCN1O60741 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HCN1O60741 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HCN1O60741 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
HCN1O60741 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.44■■□□□ 1.02
HCN1O60741 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HCN1O60741 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
HCN1O60741 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HCN1O60741 AC239859.2-201ENST00000444165 318 ntBASIC21.44■■□□□ 1.02
HCN1O60741 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.44■■□□□ 1.02
HCN1O60741 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HCN1O60741 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HCN1O60741 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
HCN1O60741 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.44■■□□□ 1.02
HCN1O60741 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HCN1O60741 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HCN1O60741 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.43■■□□□ 1.02
HCN1O60741 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
HCN1O60741 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
HCN1O60741 LINC01124-201ENST00000409786 2117 ntBASIC21.43■■□□□ 1.02
HCN1O60741 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HCN1O60741 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HCN1O60741 AC120024.1-201ENST00000562672 995 ntBASIC21.43■■□□□ 1.02
HCN1O60741 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.43■■□□□ 1.02
HCN1O60741 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
HCN1O60741 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HCN1O60741 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HCN1O60741 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
HCN1O60741 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
HCN1O60741 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HCN1O60741 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HCN1O60741 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HCN1O60741 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.42■■□□□ 1.02
HCN1O60741 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HCN1O60741 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.42■■□□□ 1.02
HCN1O60741 BX664725.1-201ENST00000438252 379 ntBASIC21.42■■□□□ 1.02
HCN1O60741 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HCN1O60741 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
HCN1O60741 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.42■■□□□ 1.02
HCN1O60741 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HCN1O60741 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HCN1O60741 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
HCN1O60741 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HCN1O60741 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.41■■□□□ 1.02
HCN1O60741 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
HCN1O60741 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HCN1O60741 KRT125P-201ENST00000546827 989 ntBASIC21.41■■□□□ 1.02
HCN1O60741 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.41■■□□□ 1.02
HCN1O60741 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
HCN1O60741 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
HCN1O60741 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.4■■□□□ 1.02
HCN1O60741 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
HCN1O60741 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HCN1O60741 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HCN1O60741 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
HCN1O60741 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HCN1O60741 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
HCN1O60741 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.4■■□□□ 1.02
HCN1O60741 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
HCN1O60741 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HCN1O60741 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
HCN1O60741 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.4■■□□□ 1.02
HCN1O60741 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.39■■□□□ 1.02
HCN1O60741 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
HCN1O60741 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HCN1O60741 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HCN1O60741 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HCN1O60741 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
HCN1O60741 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HCN1O60741 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.39■■□□□ 1.01
HCN1O60741 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HCN1O60741 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HCN1O60741 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HCN1O60741 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HCN1O60741 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
HCN1O60741 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
HCN1O60741 AC137630.3-201ENST00000607245 391 ntBASIC21.38■■□□□ 1.01
HCN1O60741 AC011551.1-201ENST00000614101 683 ntBASIC21.38■■□□□ 1.01
HCN1O60741 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HCN1O60741 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HCN1O60741 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
HCN1O60741 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
HCN1O60741 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HCN1O60741 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.37■■□□□ 1.01
HCN1O60741 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HCN1O60741 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.37■■□□□ 1.01
HCN1O60741 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HCN1O60741 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms