Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC26.29■■□□□ 1.8
CCNT1O60563 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
CCNT1O60563 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
CCNT1O60563 BX664725.1-201ENST00000438252 379 ntBASIC26.28■■□□□ 1.8
CCNT1O60563 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CCNT1O60563 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCNT1O60563 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCNT1O60563 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
CCNT1O60563 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC26.27■■□□□ 1.8
CCNT1O60563 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CCNT1O60563 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCNT1O60563 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.27■■□□□ 1.8
CCNT1O60563 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
CCNT1O60563 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.27■■□□□ 1.8
CCNT1O60563 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCNT1O60563 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CCNT1O60563 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.27■■□□□ 1.8
CCNT1O60563 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCNT1O60563 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CCNT1O60563 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC26.27■■□□□ 1.8
CCNT1O60563 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
CCNT1O60563 LINC00543-201ENST00000567234 1845 ntBASIC26.26■■□□□ 1.79
CCNT1O60563 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCNT1O60563 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCNT1O60563 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCNT1O60563 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCNT1O60563 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CCNT1O60563 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.26■■□□□ 1.79
CCNT1O60563 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CCNT1O60563 AL035685.1-201ENST00000636663 812 ntBASIC26.26■■□□□ 1.79
CCNT1O60563 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCNT1O60563 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCNT1O60563 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCNT1O60563 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCNT1O60563 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
CCNT1O60563 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCNT1O60563 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.25■■□□□ 1.79
CCNT1O60563 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CCNT1O60563 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCNT1O60563 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
CCNT1O60563 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC26.25■■□□□ 1.79
CCNT1O60563 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCNT1O60563 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.24■■□□□ 1.79
CCNT1O60563 AC239859.2-201ENST00000444165 318 ntBASIC26.24■■□□□ 1.79
CCNT1O60563 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.24■■□□□ 1.79
CCNT1O60563 Z92544.1-202ENST00000571933 1220 ntBASIC26.24■■□□□ 1.79
CCNT1O60563 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCNT1O60563 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CCNT1O60563 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC26.24■■□□□ 1.79
CCNT1O60563 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC26.23■■□□□ 1.79
CCNT1O60563 AC021242.3-201ENST00000607598 1377 ntBASIC26.23■■□□□ 1.79
CCNT1O60563 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCNT1O60563 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CCNT1O60563 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.23■■□□□ 1.79
CCNT1O60563 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCNT1O60563 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCNT1O60563 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
CCNT1O60563 AC131274.2-201ENST00000580697 1507 ntBASIC26.23■■□□□ 1.79
CCNT1O60563 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCNT1O60563 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CCNT1O60563 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCNT1O60563 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CCNT1O60563 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CCNT1O60563 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.22■■□□□ 1.79
CCNT1O60563 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
CCNT1O60563 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CCNT1O60563 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
CCNT1O60563 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC26.21■■□□□ 1.79
CCNT1O60563 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
CCNT1O60563 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.21■■□□□ 1.79
CCNT1O60563 KRT125P-201ENST00000546827 989 ntBASIC26.21■■□□□ 1.79
CCNT1O60563 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.21■■□□□ 1.79
CCNT1O60563 AL022069.1-201ENST00000568025 1636 ntBASIC26.21■■□□□ 1.79
CCNT1O60563 AC141586.4-201ENST00000624558 1573 ntBASIC26.2■■□□□ 1.79
CCNT1O60563 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
CCNT1O60563 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CCNT1O60563 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CCNT1O60563 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.2■■□□□ 1.78
CCNT1O60563 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.2■■□□□ 1.78
CCNT1O60563 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.2■■□□□ 1.78
CCNT1O60563 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
CCNT1O60563 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
CCNT1O60563 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CCNT1O60563 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
CCNT1O60563 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.19■■□□□ 1.78
CCNT1O60563 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CCNT1O60563 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCNT1O60563 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
CCNT1O60563 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCNT1O60563 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CCNT1O60563 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCNT1O60563 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC26.18■■□□□ 1.78
CCNT1O60563 MIR4787-201ENST00000607364 84 ntBASIC26.18■■□□□ 1.78
CCNT1O60563 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCNT1O60563 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
CCNT1O60563 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CCNT1O60563 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
CCNT1O60563 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCNT1O60563 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CCNT1O60563 AC093323.1-202ENST00000635031 2045 ntBASIC26.17■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms