Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PDE6DO43924 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDE6DO43924 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDE6DO43924 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDE6DO43924 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDE6DO43924 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
PDE6DO43924 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDE6DO43924 GUSBP5-202ENST00000510805 1989 ntBASIC17.89■□□□□ 0.45
PDE6DO43924 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDE6DO43924 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDE6DO43924 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.88■□□□□ 0.45
PDE6DO43924 AL359258.2-201ENST00000564063 1566 ntBASIC17.88■□□□□ 0.45
PDE6DO43924 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PDE6DO43924 DUX4L28-201ENST00000623687 678 ntBASIC17.88■□□□□ 0.45
PDE6DO43924 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6DO43924 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6DO43924 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6DO43924 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
PDE6DO43924 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6DO43924 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6DO43924 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PDE6DO43924 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6DO43924 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6DO43924 AL024507.2-201ENST00000606070 2574 ntBASIC17.87■□□□□ 0.45
PDE6DO43924 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6DO43924 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6DO43924 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6DO43924 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
PDE6DO43924 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6DO43924 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6DO43924 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6DO43924 ECEL1P1-201ENST00000373592 1742 ntBASIC17.86■□□□□ 0.45
PDE6DO43924 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6DO43924 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6DO43924 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6DO43924 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6DO43924 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PDE6DO43924 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.86■□□□□ 0.45
PDE6DO43924 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6DO43924 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6DO43924 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PDE6DO43924 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6DO43924 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDE6DO43924 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDE6DO43924 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PDE6DO43924 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDE6DO43924 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDE6DO43924 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDE6DO43924 C1orf229-201ENST00000623686 2258 ntBASIC17.85■□□□□ 0.45
PDE6DO43924 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDE6DO43924 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDE6DO43924 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDE6DO43924 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.84■□□□□ 0.45
PDE6DO43924 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDE6DO43924 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDE6DO43924 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDE6DO43924 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDE6DO43924 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.84■□□□□ 0.45
PDE6DO43924 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDE6DO43924 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PDE6DO43924 DUSP8P3-201ENST00000399571 1760 ntBASIC17.84■□□□□ 0.45
PDE6DO43924 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PDE6DO43924 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDE6DO43924 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.83■□□□□ 0.45
PDE6DO43924 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PDE6DO43924 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
PDE6DO43924 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDE6DO43924 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDE6DO43924 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDE6DO43924 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDE6DO43924 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.83■□□□□ 0.44
PDE6DO43924 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
PDE6DO43924 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC17.83■□□□□ 0.44
PDE6DO43924 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDE6DO43924 ANOS2P-203ENST00000472227 1816 ntBASIC17.83■□□□□ 0.44
PDE6DO43924 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PDE6DO43924 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.83■□□□□ 0.44
PDE6DO43924 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDE6DO43924 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDE6DO43924 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
PDE6DO43924 MIR219A2-201ENST00000608502 1504 ntBASIC17.82■□□□□ 0.44
PDE6DO43924 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6DO43924 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PDE6DO43924 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6DO43924 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6DO43924 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6DO43924 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6DO43924 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6DO43924 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PDE6DO43924 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.82■□□□□ 0.44
PDE6DO43924 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6DO43924 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6DO43924 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6DO43924 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PDE6DO43924 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.82■□□□□ 0.44
PDE6DO43924 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6DO43924 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6DO43924 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PDE6DO43924 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PDE6DO43924 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms