Protein–RNA interactions for Protein: O43448

KCNAB3, Voltage-gated potassium channel subunit beta-3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNAB3O43448 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KCNAB3O43448 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
KCNAB3O43448 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
KCNAB3O43448 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KCNAB3O43448 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNAB3O43448 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
KCNAB3O43448 ABCB10P4-201ENST00000566803 2184 ntBASIC19.43■□□□□ 0.7
KCNAB3O43448 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNAB3O43448 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNAB3O43448 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
KCNAB3O43448 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNAB3O43448 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KCNAB3O43448 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNAB3O43448 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.43■□□□□ 0.7
KCNAB3O43448 AC004812.2-201ENST00000611079 2094 ntBASIC19.43■□□□□ 0.7
KCNAB3O43448 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNAB3O43448 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.43■□□□□ 0.7
KCNAB3O43448 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNAB3O43448 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNAB3O43448 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KCNAB3O43448 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCNAB3O43448 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
KCNAB3O43448 MIR3960-201ENST00000583311 91 ntBASIC19.42■□□□□ 0.7
KCNAB3O43448 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.42■□□□□ 0.7
KCNAB3O43448 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.42■□□□□ 0.7
KCNAB3O43448 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.42■□□□□ 0.7
KCNAB3O43448 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.42■□□□□ 0.7
KCNAB3O43448 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
KCNAB3O43448 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
KCNAB3O43448 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCNAB3O43448 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
KCNAB3O43448 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
KCNAB3O43448 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCNAB3O43448 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.41■□□□□ 0.7
KCNAB3O43448 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCNAB3O43448 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.41■□□□□ 0.7
KCNAB3O43448 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.41■□□□□ 0.7
KCNAB3O43448 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.41■□□□□ 0.7
KCNAB3O43448 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCNAB3O43448 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KCNAB3O43448 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.4■□□□□ 0.7
KCNAB3O43448 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
KCNAB3O43448 AL359504.2-201ENST00000605506 1601 ntBASIC19.4■□□□□ 0.7
KCNAB3O43448 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.4■□□□□ 0.7
KCNAB3O43448 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.4■□□□□ 0.7
KCNAB3O43448 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KCNAB3O43448 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.4■□□□□ 0.7
KCNAB3O43448 AC007029.1-201ENST00000604183 313 ntBASIC19.4■□□□□ 0.7
KCNAB3O43448 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KCNAB3O43448 KRT8P33-201ENST00000508125 1423 ntBASIC19.4■□□□□ 0.7
KCNAB3O43448 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
KCNAB3O43448 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
KCNAB3O43448 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
KCNAB3O43448 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
KCNAB3O43448 SLC6A10P-202ENST00000431994 2058 ntBASIC19.39■□□□□ 0.69
KCNAB3O43448 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCNAB3O43448 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KCNAB3O43448 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCNAB3O43448 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.39■□□□□ 0.69
KCNAB3O43448 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCNAB3O43448 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCNAB3O43448 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCNAB3O43448 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCNAB3O43448 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCNAB3O43448 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCNAB3O43448 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KCNAB3O43448 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
KCNAB3O43448 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.38■□□□□ 0.69
KCNAB3O43448 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
KCNAB3O43448 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCNAB3O43448 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCNAB3O43448 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCNAB3O43448 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCNAB3O43448 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.37■□□□□ 0.69
KCNAB3O43448 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCNAB3O43448 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCNAB3O43448 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCNAB3O43448 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KCNAB3O43448 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KCNAB3O43448 AL356441.2-201ENST00000443009 864 ntBASIC19.37■□□□□ 0.69
KCNAB3O43448 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCNAB3O43448 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
KCNAB3O43448 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.37■□□□□ 0.69
KCNAB3O43448 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCNAB3O43448 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.36■□□□□ 0.69
KCNAB3O43448 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
KCNAB3O43448 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
KCNAB3O43448 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
KCNAB3O43448 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCNAB3O43448 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KCNAB3O43448 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCNAB3O43448 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.36■□□□□ 0.69
KCNAB3O43448 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCNAB3O43448 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.36■□□□□ 0.69
KCNAB3O43448 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KCNAB3O43448 EP400NL-214ENST00000641289 2402 ntBASIC19.35■□□□□ 0.69
KCNAB3O43448 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
KCNAB3O43448 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
KCNAB3O43448 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KCNAB3O43448 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms