Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.83■■□□□ 1.09
RRP8O43159 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.83■■□□□ 1.09
RRP8O43159 AC011298.3-201ENST00000615796 283 ntBASIC21.83■■□□□ 1.09
RRP8O43159 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RRP8O43159 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.83■■□□□ 1.08
RRP8O43159 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
RRP8O43159 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
RRP8O43159 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RRP8O43159 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RRP8O43159 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RRP8O43159 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RRP8O43159 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RRP8O43159 AP004609.3-201ENST00000610705 1884 ntBASIC21.82■■□□□ 1.08
RRP8O43159 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RRP8O43159 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RRP8O43159 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.82■■□□□ 1.08
RRP8O43159 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RRP8O43159 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.82■■□□□ 1.08
RRP8O43159 AC022517.1-201ENST00000592429 346 ntBASIC21.82■■□□□ 1.08
RRP8O43159 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
RRP8O43159 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
RRP8O43159 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.82■■□□□ 1.08
RRP8O43159 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RRP8O43159 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.81■■□□□ 1.08
RRP8O43159 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RRP8O43159 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.81■■□□□ 1.08
RRP8O43159 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.81■■□□□ 1.08
RRP8O43159 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.81■■□□□ 1.08
RRP8O43159 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.81■■□□□ 1.08
RRP8O43159 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RRP8O43159 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RRP8O43159 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
RRP8O43159 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RRP8O43159 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.8■■□□□ 1.08
RRP8O43159 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.8■■□□□ 1.08
RRP8O43159 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RRP8O43159 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.8■■□□□ 1.08
RRP8O43159 IKBKGP1-201ENST00000612193 1073 ntBASIC21.8■■□□□ 1.08
RRP8O43159 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.8■■□□□ 1.08
RRP8O43159 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
RRP8O43159 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RRP8O43159 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RRP8O43159 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RRP8O43159 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RRP8O43159 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.79■■□□□ 1.08
RRP8O43159 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.79■■□□□ 1.08
RRP8O43159 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RRP8O43159 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
RRP8O43159 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.79■■□□□ 1.08
RRP8O43159 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.78■■□□□ 1.08
RRP8O43159 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RRP8O43159 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.78■■□□□ 1.08
RRP8O43159 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.78■■□□□ 1.08
RRP8O43159 SLC47A1P1-202ENST00000449666 945 ntBASIC21.78■■□□□ 1.08
RRP8O43159 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.78■■□□□ 1.08
RRP8O43159 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.78■■□□□ 1.08
RRP8O43159 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RRP8O43159 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RRP8O43159 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.77■■□□□ 1.08
RRP8O43159 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RRP8O43159 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
RRP8O43159 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.77■■□□□ 1.08
RRP8O43159 AC099791.2-201ENST00000605725 427 ntBASIC21.77■■□□□ 1.08
RRP8O43159 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RRP8O43159 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
RRP8O43159 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RRP8O43159 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RRP8O43159 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RRP8O43159 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RRP8O43159 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.76■■□□□ 1.07
RRP8O43159 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RRP8O43159 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
RRP8O43159 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.75■■□□□ 1.07
RRP8O43159 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.75■■□□□ 1.07
RRP8O43159 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RRP8O43159 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RRP8O43159 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.74■■□□□ 1.07
RRP8O43159 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.74■■□□□ 1.07
RRP8O43159 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RRP8O43159 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.74■■□□□ 1.07
RRP8O43159 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.74■■□□□ 1.07
RRP8O43159 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RRP8O43159 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RRP8O43159 ID1-201ENST00000376105 1233 ntBASIC21.73■■□□□ 1.07
RRP8O43159 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RRP8O43159 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.73■■□□□ 1.07
RRP8O43159 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.73■■□□□ 1.07
RRP8O43159 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RRP8O43159 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
RRP8O43159 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RRP8O43159 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.73■■□□□ 1.07
RRP8O43159 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RRP8O43159 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
RRP8O43159 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.72■■□□□ 1.07
RRP8O43159 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.72■■□□□ 1.07
RRP8O43159 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.72■■□□□ 1.07
RRP8O43159 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RRP8O43159 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.72■■□□□ 1.07
RRP8O43159 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RRP8O43159 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms