Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.28■■□□□ 1.32
MID1O15344 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
MID1O15344 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
MID1O15344 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.27■■□□□ 1.32
MID1O15344 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
MID1O15344 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
MID1O15344 MIR638-201ENST00000385237 100 ntBASIC23.26■■□□□ 1.31
MID1O15344 MIR6089-201ENST00000616698 64 ntBASIC23.26■■□□□ 1.31
MID1O15344 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
MID1O15344 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
MID1O15344 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
MID1O15344 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.25■■□□□ 1.31
MID1O15344 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
MID1O15344 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.25■■□□□ 1.31
MID1O15344 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.25■■□□□ 1.31
MID1O15344 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
MID1O15344 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.25■■□□□ 1.31
MID1O15344 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
MID1O15344 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.24■■□□□ 1.31
MID1O15344 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
MID1O15344 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
MID1O15344 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
MID1O15344 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
MID1O15344 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
MID1O15344 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
MID1O15344 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.24■■□□□ 1.31
MID1O15344 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.23■■□□□ 1.31
MID1O15344 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
MID1O15344 AC096631.2-201ENST00000436136 790 ntBASIC23.23■■□□□ 1.31
MID1O15344 AC110285.6-201ENST00000617652 491 ntBASIC23.23■■□□□ 1.31
MID1O15344 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
MID1O15344 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
MID1O15344 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.23■■□□□ 1.31
MID1O15344 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
MID1O15344 AC131274.2-201ENST00000580697 1507 ntBASIC23.23■■□□□ 1.31
MID1O15344 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
MID1O15344 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.22■■□□□ 1.31
MID1O15344 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
MID1O15344 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
MID1O15344 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
MID1O15344 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.22■■□□□ 1.31
MID1O15344 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
MID1O15344 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
MID1O15344 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
MID1O15344 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
MID1O15344 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
MID1O15344 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.21■■□□□ 1.31
MID1O15344 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
MID1O15344 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
MID1O15344 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
MID1O15344 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
MID1O15344 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
MID1O15344 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.19■■□□□ 1.3
MID1O15344 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MID1O15344 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
MID1O15344 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
MID1O15344 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.18■■□□□ 1.3
MID1O15344 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
MID1O15344 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
MID1O15344 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.18■■□□□ 1.3
MID1O15344 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
MID1O15344 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
MID1O15344 AC005703.6-201ENST00000623265 1329 ntBASIC23.17■■□□□ 1.3
MID1O15344 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
MID1O15344 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
MID1O15344 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
MID1O15344 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
MID1O15344 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
MID1O15344 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.16■■□□□ 1.3
MID1O15344 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.16■■□□□ 1.3
MID1O15344 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.16■■□□□ 1.3
MID1O15344 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.16■■□□□ 1.3
MID1O15344 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.16■■□□□ 1.3
MID1O15344 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
MID1O15344 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
MID1O15344 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
MID1O15344 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.15■■□□□ 1.3
MID1O15344 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.15■■□□□ 1.3
MID1O15344 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
MID1O15344 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
MID1O15344 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
MID1O15344 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.15■■□□□ 1.3
MID1O15344 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
MID1O15344 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
MID1O15344 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
MID1O15344 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
MID1O15344 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.15■■□□□ 1.3
MID1O15344 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.15■■□□□ 1.3
MID1O15344 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
MID1O15344 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
MID1O15344 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
MID1O15344 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
MID1O15344 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
MID1O15344 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
MID1O15344 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
MID1O15344 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
MID1O15344 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
MID1O15344 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
MID1O15344 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.13■■□□□ 1.29
MID1O15344 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms