Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMAD9O15198 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SMAD9O15198 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMAD9O15198 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMAD9O15198 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.82■□□□□ 0.92
SMAD9O15198 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SMAD9O15198 AP003733.4-201ENST00000623785 1697 ntBASIC20.82■□□□□ 0.92
SMAD9O15198 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.82■□□□□ 0.92
SMAD9O15198 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
SMAD9O15198 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
SMAD9O15198 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMAD9O15198 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMAD9O15198 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.81■□□□□ 0.92
SMAD9O15198 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
SMAD9O15198 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
SMAD9O15198 AL035685.1-201ENST00000636663 812 ntBASIC20.81■□□□□ 0.92
SMAD9O15198 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMAD9O15198 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMAD9O15198 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.8■□□□□ 0.92
SMAD9O15198 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
SMAD9O15198 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMAD9O15198 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.8■□□□□ 0.92
SMAD9O15198 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.8■□□□□ 0.92
SMAD9O15198 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMAD9O15198 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.8■□□□□ 0.92
SMAD9O15198 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMAD9O15198 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMAD9O15198 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMAD9O15198 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMAD9O15198 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.79■□□□□ 0.92
SMAD9O15198 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMAD9O15198 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMAD9O15198 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.79■□□□□ 0.92
SMAD9O15198 AC137630.3-201ENST00000607245 391 ntBASIC20.79■□□□□ 0.92
SMAD9O15198 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SMAD9O15198 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMAD9O15198 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMAD9O15198 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMAD9O15198 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SMAD9O15198 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMAD9O15198 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.78■□□□□ 0.92
SMAD9O15198 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMAD9O15198 AF131216.4-201ENST00000638924 1588 ntBASIC20.78■□□□□ 0.92
SMAD9O15198 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SMAD9O15198 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.78■□□□□ 0.92
SMAD9O15198 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.78■□□□□ 0.92
SMAD9O15198 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMAD9O15198 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.78■□□□□ 0.92
SMAD9O15198 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMAD9O15198 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMAD9O15198 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMAD9O15198 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.77■□□□□ 0.92
SMAD9O15198 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMAD9O15198 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMAD9O15198 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMAD9O15198 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMAD9O15198 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SMAD9O15198 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.77■□□□□ 0.92
SMAD9O15198 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.77■□□□□ 0.92
SMAD9O15198 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.77■□□□□ 0.92
SMAD9O15198 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMAD9O15198 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
SMAD9O15198 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMAD9O15198 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SMAD9O15198 BX664725.1-201ENST00000438252 379 ntBASIC20.76■□□□□ 0.91
SMAD9O15198 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.76■□□□□ 0.91
SMAD9O15198 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMAD9O15198 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMAD9O15198 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMAD9O15198 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMAD9O15198 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.75■□□□□ 0.91
SMAD9O15198 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMAD9O15198 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMAD9O15198 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SMAD9O15198 HLA-L-211ENST00000482052 1765 ntBASIC20.74■□□□□ 0.91
SMAD9O15198 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMAD9O15198 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMAD9O15198 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMAD9O15198 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.74■□□□□ 0.91
SMAD9O15198 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMAD9O15198 Z92544.1-202ENST00000571933 1220 ntBASIC20.74■□□□□ 0.91
SMAD9O15198 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMAD9O15198 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SMAD9O15198 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMAD9O15198 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMAD9O15198 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMAD9O15198 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
SMAD9O15198 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.73■□□□□ 0.91
SMAD9O15198 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.73■□□□□ 0.91
SMAD9O15198 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMAD9O15198 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMAD9O15198 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SMAD9O15198 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.72■□□□□ 0.91
SMAD9O15198 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMAD9O15198 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
SMAD9O15198 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.72■□□□□ 0.91
SMAD9O15198 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMAD9O15198 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.72■□□□□ 0.91
SMAD9O15198 AC239859.2-201ENST00000444165 318 ntBASIC20.72■□□□□ 0.91
SMAD9O15198 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms