Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLIC1O00299 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLIC1O00299 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.76■■□□□ 1.07
CLIC1O00299 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.76■■□□□ 1.07
CLIC1O00299 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.76■■□□□ 1.07
CLIC1O00299 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLIC1O00299 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.76■■□□□ 1.07
CLIC1O00299 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.76■■□□□ 1.07
CLIC1O00299 AC018755.3-202ENST00000596210 929 ntBASIC21.76■■□□□ 1.07
CLIC1O00299 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLIC1O00299 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLIC1O00299 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLIC1O00299 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.75■■□□□ 1.07
CLIC1O00299 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.75■■□□□ 1.07
CLIC1O00299 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.75■■□□□ 1.07
CLIC1O00299 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLIC1O00299 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.75■■□□□ 1.07
CLIC1O00299 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLIC1O00299 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.74■■□□□ 1.07
CLIC1O00299 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CLIC1O00299 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CLIC1O00299 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.74■■□□□ 1.07
CLIC1O00299 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.74■■□□□ 1.07
CLIC1O00299 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CLIC1O00299 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLIC1O00299 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.74■■□□□ 1.07
CLIC1O00299 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CLIC1O00299 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CLIC1O00299 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLIC1O00299 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLIC1O00299 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLIC1O00299 AC090877.2-201ENST00000558441 1738 ntBASIC21.73■■□□□ 1.07
CLIC1O00299 AL592293.1-201ENST00000502889 1188 ntBASIC21.73■■□□□ 1.07
CLIC1O00299 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.73■■□□□ 1.07
CLIC1O00299 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.73■■□□□ 1.07
CLIC1O00299 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CLIC1O00299 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLIC1O00299 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLIC1O00299 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLIC1O00299 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLIC1O00299 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLIC1O00299 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLIC1O00299 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.72■■□□□ 1.07
CLIC1O00299 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.72■■□□□ 1.07
CLIC1O00299 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLIC1O00299 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLIC1O00299 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.71■■□□□ 1.07
CLIC1O00299 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLIC1O00299 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLIC1O00299 SPCS2P3-201ENST00000500401 656 ntBASIC21.71■■□□□ 1.07
CLIC1O00299 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.71■■□□□ 1.07
CLIC1O00299 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.71■■□□□ 1.07
CLIC1O00299 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
CLIC1O00299 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLIC1O00299 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLIC1O00299 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLIC1O00299 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.71■■□□□ 1.07
CLIC1O00299 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CLIC1O00299 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLIC1O00299 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLIC1O00299 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CLIC1O00299 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLIC1O00299 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLIC1O00299 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLIC1O00299 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLIC1O00299 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLIC1O00299 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
CLIC1O00299 C9orf163-202ENST00000624034 2573 ntBASIC21.69■■□□□ 1.06
CLIC1O00299 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLIC1O00299 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLIC1O00299 AC087393.1-201ENST00000582896 145 ntBASIC21.69■■□□□ 1.06
CLIC1O00299 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
CLIC1O00299 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.69■■□□□ 1.06
CLIC1O00299 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLIC1O00299 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.69■■□□□ 1.06
CLIC1O00299 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLIC1O00299 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CLIC1O00299 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLIC1O00299 AL592295.1-201ENST00000400984 884 ntBASIC21.68■■□□□ 1.06
CLIC1O00299 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLIC1O00299 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.68■■□□□ 1.06
CLIC1O00299 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLIC1O00299 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CLIC1O00299 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLIC1O00299 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
CLIC1O00299 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLIC1O00299 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CLIC1O00299 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLIC1O00299 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLIC1O00299 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CLIC1O00299 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLIC1O00299 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLIC1O00299 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLIC1O00299 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLIC1O00299 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.67■■□□□ 1.06
CLIC1O00299 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLIC1O00299 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLIC1O00299 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLIC1O00299 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.67■■□□□ 1.06
CLIC1O00299 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms