Protein–RNA interactions for Protein: A6NLU0

RFPL4A, Ret finger protein-like 4A, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4AA6NLU0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.84■□□□□ 0.77
RFPL4AA6NLU0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RFPL4AA6NLU0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFPL4AA6NLU0 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RFPL4AA6NLU0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFPL4AA6NLU0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFPL4AA6NLU0 DUX4L18-201ENST00000553347 1267 ntBASIC19.83■□□□□ 0.77
RFPL4AA6NLU0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFPL4AA6NLU0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.82■□□□□ 0.76
RFPL4AA6NLU0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFPL4AA6NLU0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFPL4AA6NLU0 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFPL4AA6NLU0 AC087393.1-201ENST00000582896 145 ntBASIC19.82■□□□□ 0.76
RFPL4AA6NLU0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.82■□□□□ 0.76
RFPL4AA6NLU0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.82■□□□□ 0.76
RFPL4AA6NLU0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFPL4AA6NLU0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFPL4AA6NLU0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFPL4AA6NLU0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RFPL4AA6NLU0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFPL4AA6NLU0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RFPL4AA6NLU0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFPL4AA6NLU0 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RFPL4AA6NLU0 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RFPL4AA6NLU0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RFPL4AA6NLU0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFPL4AA6NLU0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFPL4AA6NLU0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RFPL4AA6NLU0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.81■□□□□ 0.76
RFPL4AA6NLU0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFPL4AA6NLU0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RFPL4AA6NLU0 FOXO3B-201ENST00000395675 1928 ntBASIC19.8■□□□□ 0.76
RFPL4AA6NLU0 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFPL4AA6NLU0 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFPL4AA6NLU0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RFPL4AA6NLU0 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFPL4AA6NLU0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.8■□□□□ 0.76
RFPL4AA6NLU0 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RFPL4AA6NLU0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFPL4AA6NLU0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.8■□□□□ 0.76
RFPL4AA6NLU0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
RFPL4AA6NLU0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RFPL4AA6NLU0 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.8■□□□□ 0.76
RFPL4AA6NLU0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.8■□□□□ 0.76
RFPL4AA6NLU0 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.8■□□□□ 0.76
RFPL4AA6NLU0 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFPL4AA6NLU0 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFPL4AA6NLU0 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFPL4AA6NLU0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFPL4AA6NLU0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RFPL4AA6NLU0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.8■□□□□ 0.76
RFPL4AA6NLU0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
RFPL4AA6NLU0 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFPL4AA6NLU0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFPL4AA6NLU0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFPL4AA6NLU0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFPL4AA6NLU0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFPL4AA6NLU0 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFPL4AA6NLU0 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFPL4AA6NLU0 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFPL4AA6NLU0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFPL4AA6NLU0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RFPL4AA6NLU0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFPL4AA6NLU0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFPL4AA6NLU0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RFPL4AA6NLU0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFPL4AA6NLU0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
RFPL4AA6NLU0 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RFPL4AA6NLU0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFPL4AA6NLU0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFPL4AA6NLU0 AC004987.1-201ENST00000428627 508 ntBASIC19.78■□□□□ 0.76
RFPL4AA6NLU0 ATP5G2P3-201ENST00000429083 425 ntBASIC19.78■□□□□ 0.76
RFPL4AA6NLU0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.78■□□□□ 0.76
RFPL4AA6NLU0 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.78■□□□□ 0.76
RFPL4AA6NLU0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.78■□□□□ 0.76
RFPL4AA6NLU0 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFPL4AA6NLU0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFPL4AA6NLU0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFPL4AA6NLU0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RFPL4AA6NLU0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.77■□□□□ 0.76
RFPL4AA6NLU0 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RFPL4AA6NLU0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.77■□□□□ 0.76
RFPL4AA6NLU0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFPL4AA6NLU0 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.77■□□□□ 0.76
RFPL4AA6NLU0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFPL4AA6NLU0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFPL4AA6NLU0 AC141586.4-201ENST00000624558 1573 ntBASIC19.77■□□□□ 0.76
RFPL4AA6NLU0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
RFPL4AA6NLU0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
RFPL4AA6NLU0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFPL4AA6NLU0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFPL4AA6NLU0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RFPL4AA6NLU0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.76■□□□□ 0.75
RFPL4AA6NLU0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFPL4AA6NLU0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.76■□□□□ 0.75
RFPL4AA6NLU0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFPL4AA6NLU0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFPL4AA6NLU0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.76■□□□□ 0.75
RFPL4AA6NLU0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RFPL4AA6NLU0 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms