Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 AL024507.2-201ENST00000606070 2574 ntBASIC17.75■□□□□ 0.43
TRAV34A0A0B4J273 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV34A0A0B4J273 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV34A0A0B4J273 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.75■□□□□ 0.43
TRAV34A0A0B4J273 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC17.75■□□□□ 0.43
TRAV34A0A0B4J273 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.75■□□□□ 0.43
TRAV34A0A0B4J273 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV34A0A0B4J273 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV34A0A0B4J273 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV34A0A0B4J273 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.74■□□□□ 0.43
TRAV34A0A0B4J273 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV34A0A0B4J273 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAV34A0A0B4J273 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV34A0A0B4J273 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV34A0A0B4J273 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TRAV34A0A0B4J273 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRAV34A0A0B4J273 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRAV34A0A0B4J273 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV34A0A0B4J273 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV34A0A0B4J273 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV34A0A0B4J273 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV34A0A0B4J273 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TRAV34A0A0B4J273 MIR6089-201ENST00000616698 64 ntBASIC17.73■□□□□ 0.43
TRAV34A0A0B4J273 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC17.73■□□□□ 0.43
TRAV34A0A0B4J273 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV34A0A0B4J273 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV34A0A0B4J273 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV34A0A0B4J273 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV34A0A0B4J273 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV34A0A0B4J273 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRAV34A0A0B4J273 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV34A0A0B4J273 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV34A0A0B4J273 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV34A0A0B4J273 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV34A0A0B4J273 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV34A0A0B4J273 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV34A0A0B4J273 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV34A0A0B4J273 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TRAV34A0A0B4J273 HES6-205ENST00000409356 528 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV34A0A0B4J273 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV34A0A0B4J273 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
TRAV34A0A0B4J273 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.72■□□□□ 0.43
TRAV34A0A0B4J273 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TRAV34A0A0B4J273 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV34A0A0B4J273 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV34A0A0B4J273 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRAV34A0A0B4J273 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRAV34A0A0B4J273 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV34A0A0B4J273 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.71■□□□□ 0.43
TRAV34A0A0B4J273 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV34A0A0B4J273 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV34A0A0B4J273 DUX4L11-201ENST00000611504 1267 ntBASIC17.71■□□□□ 0.43
TRAV34A0A0B4J273 DUX4L12-201ENST00000614593 1267 ntBASIC17.71■□□□□ 0.43
TRAV34A0A0B4J273 DUX4L14-201ENST00000621227 1267 ntBASIC17.71■□□□□ 0.43
TRAV34A0A0B4J273 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV34A0A0B4J273 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.71■□□□□ 0.43
TRAV34A0A0B4J273 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV34A0A0B4J273 HLA-L-211ENST00000482052 1765 ntBASIC17.71■□□□□ 0.43
TRAV34A0A0B4J273 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRAV34A0A0B4J273 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRAV34A0A0B4J273 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV34A0A0B4J273 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV34A0A0B4J273 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
TRAV34A0A0B4J273 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV34A0A0B4J273 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV34A0A0B4J273 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV34A0A0B4J273 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV34A0A0B4J273 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV34A0A0B4J273 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV34A0A0B4J273 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV34A0A0B4J273 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAV34A0A0B4J273 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
TRAV34A0A0B4J273 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV34A0A0B4J273 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV34A0A0B4J273 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC17.69■□□□□ 0.42
TRAV34A0A0B4J273 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC17.69■□□□□ 0.42
TRAV34A0A0B4J273 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.69■□□□□ 0.42
TRAV34A0A0B4J273 AC126177.7-201ENST00000547904 679 ntBASIC17.69■□□□□ 0.42
TRAV34A0A0B4J273 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.69■□□□□ 0.42
TRAV34A0A0B4J273 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAV34A0A0B4J273 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV34A0A0B4J273 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV34A0A0B4J273 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.69■□□□□ 0.42
TRAV34A0A0B4J273 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV34A0A0B4J273 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV34A0A0B4J273 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV34A0A0B4J273 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV34A0A0B4J273 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV34A0A0B4J273 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
TRAV34A0A0B4J273 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV34A0A0B4J273 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV34A0A0B4J273 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV34A0A0B4J273 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAV34A0A0B4J273 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV34A0A0B4J273 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAV34A0A0B4J273 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV34A0A0B4J273 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAV34A0A0B4J273 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV34A0A0B4J273 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV34A0A0B4J273 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms