Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-4A0A0B4J246 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
TRAV8-4A0A0B4J246 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-4A0A0B4J246 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-4A0A0B4J246 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-4A0A0B4J246 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-4A0A0B4J246 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-4A0A0B4J246 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-4A0A0B4J246 RAP2CP1-202ENST00000605179 643 ntBASIC16.03■□□□□ 0.16
TRAV8-4A0A0B4J246 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-4A0A0B4J246 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV8-4A0A0B4J246 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-4A0A0B4J246 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-4A0A0B4J246 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-4A0A0B4J246 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-4A0A0B4J246 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-4A0A0B4J246 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-4A0A0B4J246 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-4A0A0B4J246 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-4A0A0B4J246 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-4A0A0B4J246 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAV8-4A0A0B4J246 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-4A0A0B4J246 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-4A0A0B4J246 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-4A0A0B4J246 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC16.02■□□□□ 0.16
TRAV8-4A0A0B4J246 AC026202.3-201ENST00000600805 1127 ntBASIC16.02■□□□□ 0.16
TRAV8-4A0A0B4J246 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-4A0A0B4J246 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-4A0A0B4J246 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV8-4A0A0B4J246 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV8-4A0A0B4J246 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
TRAV8-4A0A0B4J246 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC16.02■□□□□ 0.15
TRAV8-4A0A0B4J246 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV8-4A0A0B4J246 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV8-4A0A0B4J246 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV8-4A0A0B4J246 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV8-4A0A0B4J246 AC022211.4-201ENST00000625094 2161 ntBASIC16.02■□□□□ 0.15
TRAV8-4A0A0B4J246 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-4A0A0B4J246 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
TRAV8-4A0A0B4J246 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TRAV8-4A0A0B4J246 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-4A0A0B4J246 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-4A0A0B4J246 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-4A0A0B4J246 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV8-4A0A0B4J246 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TRAV8-4A0A0B4J246 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
TRAV8-4A0A0B4J246 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-4A0A0B4J246 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-4A0A0B4J246 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-4A0A0B4J246 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-4A0A0B4J246 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-4A0A0B4J246 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC16■□□□□ 0.15
TRAV8-4A0A0B4J246 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-4A0A0B4J246 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TRAV8-4A0A0B4J246 AL024507.2-201ENST00000606070 2574 ntBASIC16■□□□□ 0.15
TRAV8-4A0A0B4J246 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-4A0A0B4J246 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-4A0A0B4J246 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16■□□□□ 0.15
TRAV8-4A0A0B4J246 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-4A0A0B4J246 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV8-4A0A0B4J246 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-4A0A0B4J246 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-4A0A0B4J246 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-4A0A0B4J246 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-4A0A0B4J246 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TRAV8-4A0A0B4J246 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-4A0A0B4J246 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TRAV8-4A0A0B4J246 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-4A0A0B4J246 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-4A0A0B4J246 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC15.99■□□□□ 0.15
TRAV8-4A0A0B4J246 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-4A0A0B4J246 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-4A0A0B4J246 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-4A0A0B4J246 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TRAV8-4A0A0B4J246 AP003733.4-201ENST00000623785 1697 ntBASIC15.99■□□□□ 0.15
TRAV8-4A0A0B4J246 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV8-4A0A0B4J246 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV8-4A0A0B4J246 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRAV8-4A0A0B4J246 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRAV8-4A0A0B4J246 AC133552.2-201ENST00000619106 1032 ntBASIC15.98■□□□□ 0.15
TRAV8-4A0A0B4J246 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
TRAV8-4A0A0B4J246 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAV8-4A0A0B4J246 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TRAV8-4A0A0B4J246 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV8-4A0A0B4J246 CASK-201ENST00000378154 2494 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV8-4A0A0B4J246 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV8-4A0A0B4J246 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV8-4A0A0B4J246 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV8-4A0A0B4J246 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV8-4A0A0B4J246 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV8-4A0A0B4J246 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
TRAV8-4A0A0B4J246 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV8-4A0A0B4J246 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV8-4A0A0B4J246 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TRAV8-4A0A0B4J246 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV8-4A0A0B4J246 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV8-4A0A0B4J246 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV8-4A0A0B4J246 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV8-4A0A0B4J246 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRAV8-4A0A0B4J246 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms