Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV10A0A0B4J240 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV10A0A0B4J240 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV10A0A0B4J240 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV10A0A0B4J240 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV10A0A0B4J240 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TRAV10A0A0B4J240 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV10A0A0B4J240 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV10A0A0B4J240 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TRAV10A0A0B4J240 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV10A0A0B4J240 CLTA-206ENST00000466396 695 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAV10A0A0B4J240 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC16.3■□□□□ 0.2
TRAV10A0A0B4J240 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV10A0A0B4J240 AL139246.5-201ENST00000606645 996 ntBASIC16.3■□□□□ 0.2
TRAV10A0A0B4J240 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV10A0A0B4J240 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAV10A0A0B4J240 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV10A0A0B4J240 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAV10A0A0B4J240 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TRAV10A0A0B4J240 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV10A0A0B4J240 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV10A0A0B4J240 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.29■□□□□ 0.2
TRAV10A0A0B4J240 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAV10A0A0B4J240 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV10A0A0B4J240 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAV10A0A0B4J240 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRAV10A0A0B4J240 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV10A0A0B4J240 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV10A0A0B4J240 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV10A0A0B4J240 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRAV10A0A0B4J240 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV10A0A0B4J240 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV10A0A0B4J240 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV10A0A0B4J240 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV10A0A0B4J240 MIR6089-201ENST00000616698 64 ntBASIC16.28■□□□□ 0.2
TRAV10A0A0B4J240 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.28■□□□□ 0.2
TRAV10A0A0B4J240 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRAV10A0A0B4J240 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV10A0A0B4J240 CEBPA-AS1-201ENST00000592982 2198 ntBASIC16.28■□□□□ 0.2
TRAV10A0A0B4J240 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV10A0A0B4J240 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV10A0A0B4J240 AC091060.1-201ENST00000623524 1766 ntBASIC16.28■□□□□ 0.2
TRAV10A0A0B4J240 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TRAV10A0A0B4J240 AC005703.6-201ENST00000623265 1329 ntBASIC16.27■□□□□ 0.2
TRAV10A0A0B4J240 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TRAV10A0A0B4J240 AL512631.2-201ENST00000604634 923 ntBASIC16.27■□□□□ 0.2
TRAV10A0A0B4J240 MIR4466-201ENST00000606121 54 ntBASIC16.27■□□□□ 0.2
TRAV10A0A0B4J240 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV10A0A0B4J240 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV10A0A0B4J240 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.19
TRAV10A0A0B4J240 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV10A0A0B4J240 SLC6A10P-202ENST00000431994 2058 ntBASIC16.26■□□□□ 0.19
TRAV10A0A0B4J240 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV10A0A0B4J240 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV10A0A0B4J240 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRAV10A0A0B4J240 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
TRAV10A0A0B4J240 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV10A0A0B4J240 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV10A0A0B4J240 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV10A0A0B4J240 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
TRAV10A0A0B4J240 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV10A0A0B4J240 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV10A0A0B4J240 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV10A0A0B4J240 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV10A0A0B4J240 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRAV10A0A0B4J240 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV10A0A0B4J240 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV10A0A0B4J240 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV10A0A0B4J240 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV10A0A0B4J240 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV10A0A0B4J240 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.25■□□□□ 0.19
TRAV10A0A0B4J240 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV10A0A0B4J240 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV10A0A0B4J240 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV10A0A0B4J240 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV10A0A0B4J240 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV10A0A0B4J240 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV10A0A0B4J240 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV10A0A0B4J240 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV10A0A0B4J240 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRAV10A0A0B4J240 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV10A0A0B4J240 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV10A0A0B4J240 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV10A0A0B4J240 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV10A0A0B4J240 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.24■□□□□ 0.19
TRAV10A0A0B4J240 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRAV10A0A0B4J240 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16.24■□□□□ 0.19
TRAV10A0A0B4J240 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV10A0A0B4J240 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV10A0A0B4J240 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV10A0A0B4J240 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV10A0A0B4J240 AL022069.1-201ENST00000568025 1636 ntBASIC16.23■□□□□ 0.19
TRAV10A0A0B4J240 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV10A0A0B4J240 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV10A0A0B4J240 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV10A0A0B4J240 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC16.23■□□□□ 0.19
TRAV10A0A0B4J240 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TRAV10A0A0B4J240 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV10A0A0B4J240 MIR638-201ENST00000385237 100 ntBASIC16.23■□□□□ 0.19
TRAV10A0A0B4J240 AC096631.2-201ENST00000436136 790 ntBASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms