Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 LINC00543-201ENST00000567234 1845 ntBASIC16.24■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC16.23■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 AC018755.3-202ENST00000596210 929 ntBASIC16.22■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 U85056.1-201ENST00000616429 682 ntBASIC16.22■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 AL592293.1-201ENST00000502889 1188 ntBASIC16.21■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 DUSP8P5-201ENST00000422884 1815 ntBASIC16.21■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAV8-3A0A0A6YYJ7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC16.21■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC16.2■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 SLC6A10P-202ENST00000431994 2058 ntBASIC16.19■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-3A0A0A6YYJ7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms