Protein–RNA interactions for Protein: A0A075B6M9

TRBV23OR9-2, T-cell receptor beta variable 23/OR9-2 (pseudogene) (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23OR9-2A0A075B6M9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.57■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.57■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 AL356740.2-201ENST00000601559 647 ntBASIC22.57■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.56■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.55■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.55■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.55■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.55■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.55■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.54■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.54■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 AC131281.2-201ENST00000520478 145 ntBASIC22.54■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.54■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.54■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 MIR3621-201ENST00000580529 85 ntBASIC22.54■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.54■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.54■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.54■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.54■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.53■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 MIR6089-201ENST00000616698 64 ntBASIC22.53■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.53■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 AC022211.4-201ENST00000625094 2161 ntBASIC22.53■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.53■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.52■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.52■■□□□ 1.2
TRBV23OR9-2A0A075B6M9 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.52■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.51■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.51■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 AC004448.1-201ENST00000458332 883 ntBASIC22.51■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.51■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 MIR6722-201ENST00000617286 78 ntBASIC22.51■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.51■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.5■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.5■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.5■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 AL136116.3-201ENST00000402907 1138 ntBASIC22.5■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.5■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.49■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 AC131274.2-201ENST00000580697 1507 ntBASIC22.49■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.49■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.49■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.49■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.48■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms