Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 SSR4P1-203ENST00000599569 2260 ntBASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 AL355864.2-201ENST00000447420 863 ntBASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 AC068587.3-201ENST00000526613 355 ntBASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 AC136621.1-201ENST00000624017 2304 ntBASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.19□□□□□ -0.14
NPIPA1Q9UND3 SBF1P1-201ENST00000444527 5631 ntBASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 AC022494.1-201ENST00000466044 728 ntBASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 AC097359.3-201ENST00000603982 1210 ntBASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 AL121723.1-201ENST00000445194 1519 ntBASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms