Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNPO2Q9UMS6 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.42■□□□□ 0.38
SYNPO2Q9UMS6 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYNPO2Q9UMS6 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.42■□□□□ 0.38
SYNPO2Q9UMS6 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.42■□□□□ 0.38
SYNPO2Q9UMS6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNPO2Q9UMS6 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SYNPO2Q9UMS6 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNPO2Q9UMS6 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYNPO2Q9UMS6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNPO2Q9UMS6 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYNPO2Q9UMS6 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 AC009093.2-202ENST00000620513 2079 ntBASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 AP000346.4-201ENST00000614827 381 ntBASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPO2Q9UMS6 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 AL008707.1-201ENST00000422498 534 ntBASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 AC005730.2-201ENST00000564549 1184 ntBASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 MIR4783-201ENST00000580343 82 ntBASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 BNIP3P13-201ENST00000599968 566 ntBASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPO2Q9UMS6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SYNPO2Q9UMS6 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
SYNPO2Q9UMS6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNPO2Q9UMS6 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNPO2Q9UMS6 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SYNPO2Q9UMS6 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.39■□□□□ 0.37
SYNPO2Q9UMS6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNPO2Q9UMS6 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.39■□□□□ 0.37
SYNPO2Q9UMS6 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNPO2Q9UMS6 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNPO2Q9UMS6 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNPO2Q9UMS6 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC17.39■□□□□ 0.37
SYNPO2Q9UMS6 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.39■□□□□ 0.37
SYNPO2Q9UMS6 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms