Protein–RNA interactions for Protein: Q9P2E5

CHPF2, Chondroitin sulfate glucuronyltransferase, humanhuman

Predictions only

Length 772 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2Q9P2E5 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHPF2Q9P2E5 AL591846.1-201ENST00000451736 433 ntBASIC19.31■□□□□ 0.68
CHPF2Q9P2E5 PFN1P12-201ENST00000455938 534 ntBASIC19.31■□□□□ 0.68
CHPF2Q9P2E5 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHPF2Q9P2E5 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHPF2Q9P2E5 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC19.31■□□□□ 0.68
CHPF2Q9P2E5 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC19.31■□□□□ 0.68
CHPF2Q9P2E5 AL096828.3-201ENST00000615354 462 ntBASIC19.31■□□□□ 0.68
CHPF2Q9P2E5 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CHPF2Q9P2E5 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC19.31■□□□□ 0.68
CHPF2Q9P2E5 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHPF2Q9P2E5 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHPF2Q9P2E5 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHPF2Q9P2E5 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHPF2Q9P2E5 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CHPF2Q9P2E5 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC19.31■□□□□ 0.68
CHPF2Q9P2E5 LILRP1-201ENST00000444199 1370 ntBASIC19.31■□□□□ 0.68
CHPF2Q9P2E5 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CHPF2Q9P2E5 INE2-201ENST00000630399 1874 ntBASIC19.31■□□□□ 0.68
CHPF2Q9P2E5 AC015818.8-201ENST00000587907 1519 ntBASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 AC138035.3-201ENST00000622706 2791 ntBASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 TISP43-201ENST00000409793 538 ntTSL 4 BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 FAM8A2P-201ENST00000528813 1142 ntBASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 RNF41-210ENST00000552244 716 ntTSL 3 BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 EMC4-209ENST00000559421 497 ntTSL 2 BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHPF2Q9P2E5 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 ING5-213ENST00000636051 4199 ntTSL 5 BASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 BTBD6P1-201ENST00000412176 1267 ntBASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 AC099548.2-209ENST00000480264 625 ntBASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 FTLP10-202ENST00000505798 471 ntBASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 AL118558.3-201ENST00000607414 1079 ntBASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 MIR6787-201ENST00000616675 61 ntBASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CHPF2Q9P2E5 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms