Protein–RNA interactions for Protein: Q9NZR2

LRP1B, Low-density lipoprotein receptor-related protein 1B, humanhuman

Predictions only

Length 4,599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1BQ9NZR2 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 AC009145.4-201ENST00000625119 1294 ntBASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 THY1-209ENST00000580275 578 ntTSL 3 BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
LRP1BQ9NZR2 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 AC008825.2-201ENST00000603374 718 ntBASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 CYP4F23P-201ENST00000593402 1579 ntBASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 COX20P1-201ENST00000366529 357 ntBASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 AL645728.2-202ENST00000641679 227 ntBASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 NAT9-220ENST00000582870 896 ntTSL 5 BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 MIR6769A-201ENST00000617340 73 ntBASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 STK33-217ENST00000534493 1895 ntTSL 2 BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 AC018629.1-201ENST00000623381 1736 ntBASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 MRPL37P1-201ENST00000592451 1337 ntBASIC9.45□□□□□ -0.9
LRP1BQ9NZR2 ACTBP7-201ENST00000418351 1124 ntBASIC9.44□□□□□ -0.9
LRP1BQ9NZR2 AC004522.1-201ENST00000419978 654 ntBASIC9.44□□□□□ -0.9
LRP1BQ9NZR2 RPL7P35-201ENST00000446943 740 ntBASIC9.44□□□□□ -0.9
LRP1BQ9NZR2 AC004066.1-201ENST00000502488 802 ntBASIC9.44□□□□□ -0.9
LRP1BQ9NZR2 CD164-210ENST00000512821 964 ntTSL 2 BASIC9.44□□□□□ -0.9
LRP1BQ9NZR2 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC9.44□□□□□ -0.9
LRP1BQ9NZR2 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC9.44□□□□□ -0.9
LRP1BQ9NZR2 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC9.44□□□□□ -0.9
LRP1BQ9NZR2 RPS5-204ENST00000598098 536 ntTSL 2 BASIC9.44□□□□□ -0.9
LRP1BQ9NZR2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LRP1BQ9NZR2 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms