Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 INTS4P2-202ENST00000614726 2019 ntBASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CUEDC1Q9NWM3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 AC026410.3-201ENST00000514280 936 ntBASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 AL359711.2-201ENST00000563105 872 ntBASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 AC120045.2-201ENST00000567334 178 ntBASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 TMEM261P1-201ENST00000604899 340 ntBASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CUEDC1Q9NWM3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms