Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 AC114812.1-204ENST00000449669 728 ntBASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 AC022137.2-201ENST00000503482 481 ntBASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 AP005018.1-201ENST00000525475 301 ntBASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BLOC1S4Q9NUP1 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.96■□□□□ 0.31
BLOC1S4Q9NUP1 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.96■□□□□ 0.31
BLOC1S4Q9NUP1 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BLOC1S4Q9NUP1 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.96■□□□□ 0.31
BLOC1S4Q9NUP1 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BLOC1S4Q9NUP1 AL390755.1-201ENST00000623716 2027 ntBASIC16.96■□□□□ 0.31
BLOC1S4Q9NUP1 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
BLOC1S4Q9NUP1 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.96■□□□□ 0.31
BLOC1S4Q9NUP1 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BLOC1S4Q9NUP1 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BLOC1S4Q9NUP1 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.96■□□□□ 0.31
BLOC1S4Q9NUP1 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
BLOC1S4Q9NUP1 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
BLOC1S4Q9NUP1 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.96■□□□□ 0.31
BLOC1S4Q9NUP1 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
BLOC1S4Q9NUP1 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.96■□□□□ 0.31
BLOC1S4Q9NUP1 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.96■□□□□ 0.31
BLOC1S4Q9NUP1 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.96■□□□□ 0.31
BLOC1S4Q9NUP1 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.96■□□□□ 0.31
BLOC1S4Q9NUP1 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.96■□□□□ 0.31
BLOC1S4Q9NUP1 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.96■□□□□ 0.31
BLOC1S4Q9NUP1 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
BLOC1S4Q9NUP1 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.96■□□□□ 0.31
BLOC1S4Q9NUP1 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.96■□□□□ 0.31
BLOC1S4Q9NUP1 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
BLOC1S4Q9NUP1 AC018442.1-201ENST00000421439 2061 ntBASIC16.96■□□□□ 0.31
BLOC1S4Q9NUP1 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BLOC1S4Q9NUP1 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.96■□□□□ 0.31
BLOC1S4Q9NUP1 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
BLOC1S4Q9NUP1 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
BLOC1S4Q9NUP1 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
BLOC1S4Q9NUP1 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.96■□□□□ 0.3
BLOC1S4Q9NUP1 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
BLOC1S4Q9NUP1 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.96■□□□□ 0.3
BLOC1S4Q9NUP1 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
BLOC1S4Q9NUP1 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
BLOC1S4Q9NUP1 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
BLOC1S4Q9NUP1 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.95■□□□□ 0.3
BLOC1S4Q9NUP1 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BLOC1S4Q9NUP1 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BLOC1S4Q9NUP1 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BLOC1S4Q9NUP1 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.95■□□□□ 0.3
BLOC1S4Q9NUP1 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BLOC1S4Q9NUP1 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
BLOC1S4Q9NUP1 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BLOC1S4Q9NUP1 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
BLOC1S4Q9NUP1 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BLOC1S4Q9NUP1 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
BLOC1S4Q9NUP1 ACTBP8-201ENST00000403258 1108 ntBASIC16.95■□□□□ 0.3
BLOC1S4Q9NUP1 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
BLOC1S4Q9NUP1 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
BLOC1S4Q9NUP1 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
BLOC1S4Q9NUP1 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.95■□□□□ 0.3
BLOC1S4Q9NUP1 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.95■□□□□ 0.3
BLOC1S4Q9NUP1 AC026434.2-201ENST00000506094 1078 ntBASIC16.95■□□□□ 0.3
BLOC1S4Q9NUP1 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.95■□□□□ 0.3
BLOC1S4Q9NUP1 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.95■□□□□ 0.3
BLOC1S4Q9NUP1 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BLOC1S4Q9NUP1 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BLOC1S4Q9NUP1 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
BLOC1S4Q9NUP1 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.95■□□□□ 0.3
BLOC1S4Q9NUP1 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BLOC1S4Q9NUP1 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
BLOC1S4Q9NUP1 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms