Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 AC007787.1-201ENST00000588095 1583 ntBASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 AC074338.1-201ENST00000416825 156 ntBASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 CEND1P1-201ENST00000451006 455 ntBASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 AC025181.2-201ENST00000606994 802 ntBASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 SLC9A7P1-202ENST00000556476 2239 ntBASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 CNTNAP3P2-201ENST00000617175 3861 ntBASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 AC117489.1-201ENST00000625169 3217 ntBASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
CDC42SE2Q9NRR3 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
CDC42SE2Q9NRR3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms