Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VTA1Q9NP79 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.99■□□□□ 0.31
VTA1Q9NP79 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
VTA1Q9NP79 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VTA1Q9NP79 LINC02199-201ENST00000506655 2702 ntBASIC16.98■□□□□ 0.31
VTA1Q9NP79 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.98■□□□□ 0.31
VTA1Q9NP79 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VTA1Q9NP79 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VTA1Q9NP79 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
VTA1Q9NP79 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.98■□□□□ 0.31
VTA1Q9NP79 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VTA1Q9NP79 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.98■□□□□ 0.31
VTA1Q9NP79 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.98■□□□□ 0.31
VTA1Q9NP79 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VTA1Q9NP79 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VTA1Q9NP79 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.98■□□□□ 0.31
VTA1Q9NP79 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.98■□□□□ 0.31
VTA1Q9NP79 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.98■□□□□ 0.31
VTA1Q9NP79 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VTA1Q9NP79 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.98■□□□□ 0.31
VTA1Q9NP79 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
VTA1Q9NP79 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.98■□□□□ 0.31
VTA1Q9NP79 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.98■□□□□ 0.31
VTA1Q9NP79 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.98■□□□□ 0.31
VTA1Q9NP79 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.98■□□□□ 0.31
VTA1Q9NP79 AC013355.1-201ENST00000562625 723 ntBASIC16.98■□□□□ 0.31
VTA1Q9NP79 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.98■□□□□ 0.31
VTA1Q9NP79 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.98■□□□□ 0.31
VTA1Q9NP79 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.98■□□□□ 0.31
VTA1Q9NP79 AL645939.5-201ENST00000606834 243 ntBASIC16.98■□□□□ 0.31
VTA1Q9NP79 AC091812.3-201ENST00000621362 345 ntBASIC16.98■□□□□ 0.31
VTA1Q9NP79 AC015967.2-201ENST00000624092 234 ntBASIC16.98■□□□□ 0.31
VTA1Q9NP79 AL162426.1-201ENST00000624141 743 ntBASIC16.98■□□□□ 0.31
VTA1Q9NP79 AC006435.4-201ENST00000625037 234 ntBASIC16.98■□□□□ 0.31
VTA1Q9NP79 AL356737.1-201ENST00000634391 234 ntBASIC16.98■□□□□ 0.31
VTA1Q9NP79 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.98■□□□□ 0.31
VTA1Q9NP79 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VTA1Q9NP79 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
VTA1Q9NP79 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VTA1Q9NP79 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VTA1Q9NP79 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VTA1Q9NP79 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VTA1Q9NP79 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VTA1Q9NP79 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.98■□□□□ 0.31
VTA1Q9NP79 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VTA1Q9NP79 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
VTA1Q9NP79 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.97■□□□□ 0.31
VTA1Q9NP79 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.97■□□□□ 0.31
VTA1Q9NP79 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VTA1Q9NP79 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VTA1Q9NP79 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VTA1Q9NP79 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.97■□□□□ 0.31
VTA1Q9NP79 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
VTA1Q9NP79 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VTA1Q9NP79 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VTA1Q9NP79 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VTA1Q9NP79 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.97■□□□□ 0.31
VTA1Q9NP79 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
VTA1Q9NP79 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
VTA1Q9NP79 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VTA1Q9NP79 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VTA1Q9NP79 AC011742.3-201ENST00000439053 820 ntBASIC16.97■□□□□ 0.31
VTA1Q9NP79 RNMTL1P1-201ENST00000454103 560 ntBASIC16.97■□□□□ 0.31
VTA1Q9NP79 RN7SL769P-201ENST00000469386 295 ntBASIC16.97■□□□□ 0.31
VTA1Q9NP79 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.97■□□□□ 0.31
VTA1Q9NP79 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
VTA1Q9NP79 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VTA1Q9NP79 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VTA1Q9NP79 AP001505.2-201ENST00000616815 443 ntBASIC16.97■□□□□ 0.31
VTA1Q9NP79 CU633904.3-201ENST00000624042 1029 ntBASIC16.97■□□□□ 0.31
VTA1Q9NP79 AC100757.4-201ENST00000626934 759 ntBASIC16.97■□□□□ 0.31
VTA1Q9NP79 AC004923.1-202ENST00000642106 209 ntBASIC16.97■□□□□ 0.31
VTA1Q9NP79 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VTA1Q9NP79 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VTA1Q9NP79 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VTA1Q9NP79 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.97■□□□□ 0.31
VTA1Q9NP79 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
VTA1Q9NP79 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.97■□□□□ 0.31
VTA1Q9NP79 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.97■□□□□ 0.31
VTA1Q9NP79 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
VTA1Q9NP79 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VTA1Q9NP79 PRAL-201ENST00000624952 3286 ntBASIC16.97■□□□□ 0.31
VTA1Q9NP79 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VTA1Q9NP79 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VTA1Q9NP79 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
VTA1Q9NP79 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VTA1Q9NP79 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VTA1Q9NP79 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
VTA1Q9NP79 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
VTA1Q9NP79 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VTA1Q9NP79 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VTA1Q9NP79 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VTA1Q9NP79 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
VTA1Q9NP79 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
VTA1Q9NP79 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.96■□□□□ 0.31
VTA1Q9NP79 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.96■□□□□ 0.31
VTA1Q9NP79 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
VTA1Q9NP79 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
VTA1Q9NP79 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.96■□□□□ 0.31
VTA1Q9NP79 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms