Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 SPDYE17-201ENST00000412399 783 ntBASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 AL353705.2-201ENST00000428243 662 ntBASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 SPDYE14P-201ENST00000442619 822 ntBASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 COX20P2-201ENST00000452636 358 ntBASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 AC109322.1-201ENST00000524499 1264 ntBASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 AC018529.2-202ENST00000611482 3087 ntBASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 RBPMS2P1-201ENST00000437762 623 ntBASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 TARDBPP1-201ENST00000442013 1203 ntBASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 ALG1L8P-201ENST00000533887 760 ntBASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 AC025678.2-201ENST00000562061 970 ntBASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 AP000845.1-201ENST00000581677 2131 ntBASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 AC005252.3-201ENST00000623855 2258 ntBASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AMBRA1Q9C0C7 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms