Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 DAD1-205ENST00000543337 501 ntTSL 3 BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 HNRNPUP1-201ENST00000554987 333 ntBASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 AC097359.3-201ENST00000603982 1210 ntBASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 LINC00628-201ENST00000628516 1289 ntBASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 AL359258.3-201ENST00000622910 2331 ntBASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 AL035456.1-201ENST00000456064 1369 ntBASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 AC127383.1-201ENST00000444697 1800 ntBASIC12.27□□□□□ -0.44
CHRDL1Q9BU40 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.27□□□□□ -0.44
CHRDL1Q9BU40 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CHRDL1Q9BU40 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.27□□□□□ -0.44
CHRDL1Q9BU40 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.27□□□□□ -0.44
CHRDL1Q9BU40 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CHRDL1Q9BU40 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CHRDL1Q9BU40 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.27□□□□□ -0.44
CHRDL1Q9BU40 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.27□□□□□ -0.44
CHRDL1Q9BU40 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.27□□□□□ -0.44
CHRDL1Q9BU40 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.27□□□□□ -0.44
CHRDL1Q9BU40 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
CHRDL1Q9BU40 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
CHRDL1Q9BU40 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CHRDL1Q9BU40 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CHRDL1Q9BU40 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 SPDYE17-201ENST00000412399 783 ntBASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 AC109322.1-201ENST00000524499 1264 ntBASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 AL512356.2-201ENST00000546955 174 ntBASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 AL691403.2-201ENST00000618460 490 ntBASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 AL137784.3-201ENST00000623858 2288 ntBASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 AC007686.3-201ENST00000619017 3487 ntBASIC12.27□□□□□ -0.45
CHRDL1Q9BU40 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms