Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.5□□□□□ -0.41
RAB40CQ96S21 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB40CQ96S21 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC12.5□□□□□ -0.41
RAB40CQ96S21 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.5□□□□□ -0.41
RAB40CQ96S21 RARRES2P8-201ENST00000566335 367 ntBASIC12.5□□□□□ -0.41
RAB40CQ96S21 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.5□□□□□ -0.41
RAB40CQ96S21 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.5□□□□□ -0.41
RAB40CQ96S21 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.5□□□□□ -0.41
RAB40CQ96S21 PTENP1-202ENST00000532280 3996 ntBASIC12.5□□□□□ -0.41
RAB40CQ96S21 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB40CQ96S21 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB40CQ96S21 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB40CQ96S21 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB40CQ96S21 AC104109.2-201ENST00000602919 1418 ntBASIC12.5□□□□□ -0.41
RAB40CQ96S21 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB40CQ96S21 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RAB40CQ96S21 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB40CQ96S21 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB40CQ96S21 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB40CQ96S21 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
RAB40CQ96S21 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB40CQ96S21 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
RAB40CQ96S21 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB40CQ96S21 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB40CQ96S21 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB40CQ96S21 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB40CQ96S21 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB40CQ96S21 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB40CQ96S21 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB40CQ96S21 DMBT1P1-203ENST00000636837 4628 ntBASIC12.49□□□□□ -0.41
RAB40CQ96S21 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
RAB40CQ96S21 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
RAB40CQ96S21 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.49□□□□□ -0.41
RAB40CQ96S21 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB40CQ96S21 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
RAB40CQ96S21 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
RAB40CQ96S21 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 AC138969.3-201ENST00000546612 1459 ntBASIC12.49□□□□□ -0.41
RAB40CQ96S21 AC138932.2-201ENST00000548268 1459 ntBASIC12.49□□□□□ -0.41
RAB40CQ96S21 AC126755.4-201ENST00000549796 1459 ntBASIC12.49□□□□□ -0.41
RAB40CQ96S21 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB40CQ96S21 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB40CQ96S21 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB40CQ96S21 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
RAB40CQ96S21 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
RAB40CQ96S21 REM2-202ENST00000536884 1331 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB40CQ96S21 BCAR1-209ENST00000546196 1340 ntBASIC12.49□□□□□ -0.41
RAB40CQ96S21 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB40CQ96S21 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC12.49□□□□□ -0.41
RAB40CQ96S21 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB40CQ96S21 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.49□□□□□ -0.41
RAB40CQ96S21 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB40CQ96S21 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.49□□□□□ -0.41
RAB40CQ96S21 AC145285.3-201ENST00000564603 959 ntBASIC12.49□□□□□ -0.41
RAB40CQ96S21 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.49□□□□□ -0.41
RAB40CQ96S21 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
RAB40CQ96S21 NKG7-205ENST00000600427 520 ntTSL 3 BASIC12.49□□□□□ -0.41
RAB40CQ96S21 AC068137.2-201ENST00000605408 478 ntBASIC12.49□□□□□ -0.41
RAB40CQ96S21 BX640515.1-201ENST00000617215 977 ntBASIC12.49□□□□□ -0.41
RAB40CQ96S21 AC008267.7-201ENST00000624570 1194 ntBASIC12.49□□□□□ -0.41
RAB40CQ96S21 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC12.49□□□□□ -0.41
RAB40CQ96S21 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
RAB40CQ96S21 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
RAB40CQ96S21 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
RAB40CQ96S21 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
RAB40CQ96S21 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB40CQ96S21 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms