Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 SNX21-203ENST00000372541 771 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 CD8B2-202ENST00000417670 633 ntBASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 POM121L8P-201ENST00000417732 1281 ntBASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 POM121L9P-203ENST00000441984 1285 ntBASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 AL391280.1-201ENST00000506969 1062 ntBASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 COX5BP1-201ENST00000507622 393 ntBASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 RNF41-210ENST00000552244 716 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 AL022328.3-201ENST00000607943 679 ntBASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC85AQ96PX6 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 RPS3-201ENST00000278572 907 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 AL645937.2-201ENST00000396808 931 ntBASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 TISP43-201ENST00000409793 538 ntTSL 4 BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 AC245100.3-201ENST00000441281 285 ntBASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 AC022616.1-201ENST00000518688 554 ntBASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 AC103810.3-201ENST00000583567 96 ntBASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 AL008638.5-201ENST00000623814 1298 ntBASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 KRT8P4-201ENST00000509735 1454 ntBASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 AC015818.8-201ENST00000587907 1519 ntBASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC85AQ96PX6 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC85AQ96PX6 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CCDC85AQ96PX6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC85AQ96PX6 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC85AQ96PX6 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC85AQ96PX6 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC85AQ96PX6 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCDC85AQ96PX6 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.93■□□□□ 0.62
CCDC85AQ96PX6 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC85AQ96PX6 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC85AQ96PX6 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC85AQ96PX6 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CCDC85AQ96PX6 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC85AQ96PX6 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC85AQ96PX6 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC85AQ96PX6 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC85AQ96PX6 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC85AQ96PX6 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC18.93■□□□□ 0.62
CCDC85AQ96PX6 PPY2P-201ENST00000582808 702 ntBASIC18.93■□□□□ 0.62
CCDC85AQ96PX6 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC85AQ96PX6 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CCDC85AQ96PX6 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC85AQ96PX6 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC85AQ96PX6 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC85AQ96PX6 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CCDC85AQ96PX6 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms