Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 AL356737.1-201ENST00000634391 234 ntBASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
CCNB3Q8WWL7 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
CCNB3Q8WWL7 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.31
CCNB3Q8WWL7 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
CCNB3Q8WWL7 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC23.27■■□□□ 1.31
CCNB3Q8WWL7 RERG-205ENST00000537647 935 ntTSL 2 BASIC23.27■■□□□ 1.31
CCNB3Q8WWL7 FOS-206ENST00000555347 1280 ntTSL 2 BASIC23.27■■□□□ 1.31
CCNB3Q8WWL7 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC23.27■■□□□ 1.31
CCNB3Q8WWL7 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC23.27■■□□□ 1.31
CCNB3Q8WWL7 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
CCNB3Q8WWL7 MIR4683-201ENST00000579659 81 ntBASIC23.27■■□□□ 1.31
CCNB3Q8WWL7 MIR4783-201ENST00000580343 82 ntBASIC23.27■■□□□ 1.31
CCNB3Q8WWL7 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
CCNB3Q8WWL7 KLK3-207ENST00000595952 969 ntTSL 3 BASIC23.27■■□□□ 1.31
CCNB3Q8WWL7 AL645939.5-201ENST00000606834 243 ntBASIC23.27■■□□□ 1.31
CCNB3Q8WWL7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCNB3Q8WWL7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCNB3Q8WWL7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCNB3Q8WWL7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCNB3Q8WWL7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCNB3Q8WWL7 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCNB3Q8WWL7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCNB3Q8WWL7 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
CCNB3Q8WWL7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC23.26■■□□□ 1.31
CCNB3Q8WWL7 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCNB3Q8WWL7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCNB3Q8WWL7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
CCNB3Q8WWL7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
CCNB3Q8WWL7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
CCNB3Q8WWL7 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC23.26■■□□□ 1.31
CCNB3Q8WWL7 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCNB3Q8WWL7 ELK2AP-201ENST00000392510 1007 ntBASIC23.26■■□□□ 1.31
CCNB3Q8WWL7 RN7SKP175-201ENST00000408472 289 ntBASIC23.26■■□□□ 1.31
CCNB3Q8WWL7 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC23.26■■□□□ 1.31
CCNB3Q8WWL7 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC23.26■■□□□ 1.31
CCNB3Q8WWL7 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC23.26■■□□□ 1.31
CCNB3Q8WWL7 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC23.26■■□□□ 1.31
CCNB3Q8WWL7 AC079328.1-201ENST00000560358 952 ntBASIC23.26■■□□□ 1.31
CCNB3Q8WWL7 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC23.26■■□□□ 1.31
CCNB3Q8WWL7 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC23.26■■□□□ 1.31
CCNB3Q8WWL7 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC23.26■■□□□ 1.31
CCNB3Q8WWL7 AP001505.2-201ENST00000616815 443 ntBASIC23.26■■□□□ 1.31
CCNB3Q8WWL7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCNB3Q8WWL7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
CCNB3Q8WWL7 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
CCNB3Q8WWL7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCNB3Q8WWL7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCNB3Q8WWL7 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCNB3Q8WWL7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CCNB3Q8WWL7 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC23.25■■□□□ 1.31
CCNB3Q8WWL7 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
CCNB3Q8WWL7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCNB3Q8WWL7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCNB3Q8WWL7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCNB3Q8WWL7 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCNB3Q8WWL7 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CCNB3Q8WWL7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCNB3Q8WWL7 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC23.25■■□□□ 1.31
CCNB3Q8WWL7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCNB3Q8WWL7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCNB3Q8WWL7 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC23.25■■□□□ 1.31
CCNB3Q8WWL7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CCNB3Q8WWL7 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCNB3Q8WWL7 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCNB3Q8WWL7 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCNB3Q8WWL7 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCNB3Q8WWL7 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCNB3Q8WWL7 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
CCNB3Q8WWL7 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC23.25■■□□□ 1.31
CCNB3Q8WWL7 COG4-212ENST00000564653 590 ntTSL 5 BASIC23.25■■□□□ 1.31
CCNB3Q8WWL7 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC23.25■■□□□ 1.31
CCNB3Q8WWL7 AC097724.1-201ENST00000609581 426 ntBASIC23.25■■□□□ 1.31
CCNB3Q8WWL7 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC23.25■■□□□ 1.31
CCNB3Q8WWL7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCNB3Q8WWL7 KRT8P19-201ENST00000551916 1455 ntBASIC23.24■■□□□ 1.31
CCNB3Q8WWL7 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCNB3Q8WWL7 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms