Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 AC022532.1-201ENST00000624563 1728 ntBASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 AC148477.4-201ENST00000613430 1793 ntBASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 MIR1202-201ENST00000408529 83 ntBASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 AC114812.1-204ENST00000449669 728 ntBASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SHKBP1Q8TBC3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 MIR1247-201ENST00000408206 136 ntBASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 C2orf69P2-201ENST00000562032 1123 ntBASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 MIR4741-201ENST00000579822 90 ntBASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 MIR3615-201ENST00000581999 87 ntBASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms