Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 RPL18AP3-201ENST00000462885 528 ntBASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 AC010234.1-201ENST00000494599 870 ntBASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 AC079328.2-201ENST00000561241 3354 ntBASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 SOD2-202ENST00000367054 815 ntTSL 2 BASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 GCOM2-201ENST00000509133 1104 ntBASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
CFAP43Q8NDM7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 WASH3P-207ENST00000560956 1394 ntBASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 KRT8P21-201ENST00000430398 1491 ntBASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 PIN4P1-201ENST00000451079 396 ntBASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 AC079112.1-201ENST00000454972 939 ntBASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 CDC23-208ENST00000505120 455 ntTSL 3 BASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 TPM1-223ENST00000560445 485 ntTSL 3 BASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 AL136301.1-201ENST00000615830 422 ntBASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 Z98259.2-201ENST00000641583 609 ntBASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CFAP43Q8NDM7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CFAP43Q8NDM7 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CFAP43Q8NDM7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CFAP43Q8NDM7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC23.33■■□□□ 1.33
CFAP43Q8NDM7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CFAP43Q8NDM7 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CFAP43Q8NDM7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC23.33■■□□□ 1.33
CFAP43Q8NDM7 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC23.33■■□□□ 1.33
CFAP43Q8NDM7 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC23.33■■□□□ 1.33
CFAP43Q8NDM7 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC23.33■■□□□ 1.33
CFAP43Q8NDM7 AC131206.1-201ENST00000538078 1211 ntBASIC23.33■■□□□ 1.33
CFAP43Q8NDM7 NAT9-211ENST00000580632 799 ntTSL 3 BASIC23.33■■□□□ 1.33
CFAP43Q8NDM7 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC23.33■■□□□ 1.33
CFAP43Q8NDM7 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC23.33■■□□□ 1.33
CFAP43Q8NDM7 AC005632.3-201ENST00000605544 308 ntBASIC23.33■■□□□ 1.33
CFAP43Q8NDM7 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC23.33■■□□□ 1.33
CFAP43Q8NDM7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CFAP43Q8NDM7 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CFAP43Q8NDM7 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
CFAP43Q8NDM7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CFAP43Q8NDM7 FAM90A7P-201ENST00000382628 1395 ntBASIC23.33■■□□□ 1.32
CFAP43Q8NDM7 FAM90A23P-201ENST00000400136 1395 ntBASIC23.33■■□□□ 1.32
CFAP43Q8NDM7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CFAP43Q8NDM7 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CFAP43Q8NDM7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CFAP43Q8NDM7 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CFAP43Q8NDM7 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC23.33■■□□□ 1.32
CFAP43Q8NDM7 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CFAP43Q8NDM7 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CFAP43Q8NDM7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms